ggKbase home page

NECEvent2014_2_3_scaffold_27_5

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(4851..5564)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, gntR family protein n=195 Tax=Clostridium difficile RepID=C9XNP5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 455
  • Evalue 3.40e-125
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 455
  • Evalue 9.70e-126
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCL29245.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 455
  • Evalue 4.80e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGTTTAATAGTATAGCTAGTAAAAAAGTTTATGAACAAGTAATTGAGCAAATACAATATAAAATACTAAATGGAGAGTTAAAAAAGGGGGATAAATTACTATCAGAAAGAGAACTGTCTGAACAAATGAATGTGAGTAGAACTTCCATAAGGGAAGCTATTAGGGTATTAGAGACTATGGGAGTGATAGAAAGCAGACAGGGTGAAGGAAATTTTATATGTACAAATATAGAAAAAACTTTAATAGAACCTTTATCTATGATTTTTAAACTTAATAATGGTACACTTGAAGATATATTAGAGCTTAGAATAATCCTAGAAATTGAGATTGCAAAACTTGCTTCAAAGAGAATAACTTCTTCTGAAGTTATAGAATTGAAACATATAATAGATGAAATGAGGGTAGAAACTAATAAAAAAGATAATAATCGAGTACTGGTGTTATTAGACCAAAAATTTCACAGTAAACTAGCAACATTAAGTAAAAATTATTTAATTCAAAGTCTTTTTATGACAGCATCAAAATTATTTGATGGATTTATAGAAGATGCAAGAGAAAAAATAATCGCAGAACCTTTTAATGAAAATATATTGCTTAAACAGCATGAAGCTATATACAATGCAGTTGTAGAAAATGATGTAGAACTTGCATGTGAGAAAGCAAAGGAACATATGGATTTTATAAGTAAAAATTATAGAAAAAATGAAAATTAA
PROTEIN sequence
Length: 238
MFNSIASKKVYEQVIEQIQYKILNGELKKGDKLLSERELSEQMNVSRTSIREAIRVLETMGVIESRQGEGNFICTNIEKTLIEPLSMIFKLNNGTLEDILELRIILEIEIAKLASKRITSSEVIELKHIIDEMRVETNKKDNNRVLVLLDQKFHSKLATLSKNYLIQSLFMTASKLFDGFIEDAREKIIAEPFNENILLKQHEAIYNAVVENDVELACEKAKEHMDFISKNYRKNEN*