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NECEvent2014_2_3_scaffold_27

Alias: 172_003_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_27_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18..1409)
DNA (1392bp) protein (464aa)
FAD/FMN-containing dehydrogenase {ECO:0000313|EMBL:CKG95850.1}; EC=1.-.-.- {ECO:0000313|EMBL:CKG95850.1};; Putative FAD-linked oxidase {ECO:0000313|EMBL:CEJ97743.1}; EC=1.1.-.- {ECO:0000313|EMBL:CEJ97
FAD binding domain protein n=150 Tax=Clostridium difficile RepID=C9XNP9_CLODC rbh
FAD/FMN-containing dehydrogenase
NECEvent2014_2_3_scaffold_27_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1420..2640)
DNA (1221bp) protein (407aa)
Electron transfer flavoFAD-binding domain protein n=176 Tax=Clostridium difficile RepID=C9XNP8_CLODC rbh
electron transfer flavoprotein subunit alpha
Electron transfer flavoFAD-binding domain protein {ECO:0000313|EMBL:EQG77690.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_27_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2654..3442)
DNA (789bp) protein (263aa)
Electron transfer flavoprotein subunit alpha n=87 Tax=Clostridium difficile RepID=Q18B33_CLOD6 rbh
etfB4; Electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:CCL21277.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_3_scaffold_27_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3459..4733)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=C9XNP6_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77531.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_27_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4851..5564)
DNA (714bp) protein (238aa)
Bacterial regulatory s, gntR family protein n=195 Tax=Clostridium difficile RepID=C9XNP5_CLODC rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCL29245.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_27_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5689..6948
DNA (1260bp) protein (420aa)
Putative membrane protein n=167 Tax=Clostridium difficile RepID=T3HY60_CLODC rbh
membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCL21273.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_27_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7228..7794
DNA (567bp) protein (189aa)
Phage integrase family protein n=147 Tax=Clostridium difficile RepID=C9XNP3_CLODC rbh
integrase/recombinase
Tyrosine DNA recombinase, XerC/XerD family {ECO:0000313|EMBL:CCK89954.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
NECEvent2014_2_3_scaffold_27_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7995..9200)
DNA (1206bp) protein (402aa)
hom1; Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pe
Homoserine dehydrogenase n=41 Tax=Clostridium difficile RepID=T3HYA3_CLODC rbh
NECEvent2014_2_3_scaffold_27_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9501..9869)
DNA (369bp) protein (123aa)
CRS1 / YhbY domain protein n=193 Tax=Clostridium difficile RepID=C9XNP1_CLODC
hypothetical protein
RNA-binding protein, YhbY family {ECO:0000313|EMBL:EHJ30624.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_27_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9921..11207)
DNA (1287bp) protein (429aa)
GTPase Obg n=3 Tax=Clostridium difficile RepID=C9XNP0_CLODC rbh
obg; Spo0B-associated GTP-binding protein
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
NECEvent2014_2_3_scaffold_27_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11309..11599)
DNA (291bp) protein (97aa)
50S ribosomal protein L27 n=221 Tax=Clostridium difficile RepID=RL27_CLOD6
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_27_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11613..11930)
DNA (318bp) protein (106aa)
Uncharacterized protein n=115 Tax=Clostridium difficile RepID=C9XNN8_CLODC
hypothetical protein
Putative ribosome-associated protein {ECO:0000313|EMBL:CCL21267.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_27_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11945..12256)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=221 Tax=Clostridium difficile RepID=RL21_CLOD6
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
NECEvent2014_2_3_scaffold_27_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12357..13778)
DNA (1422bp) protein (474aa)
rng; Ribonuclease G (RNase G) (Cytoplasmic axialfilament protein) (EC:3.1.4.-)
Ribonuclease, Rne/Rng family domain protein {ECO:0000313|EMBL:EQE67611.1}; EC=3.1.4.- {ECO:0000313|EMBL:EQE67611.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrep
Ribonuclease, Rne/Rng family domain protein n=179 Tax=Clostridium difficile RepID=T3HTF9_CLODC rbh
NECEvent2014_2_3_scaffold_27_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13796..14497)
DNA (702bp) protein (234aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=C9XNN5_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29233.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_27_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14499..16343)
DNA (1845bp) protein (615aa)
Radical SAM superfamily protein n=170 Tax=Clostridium difficile RepID=T3HWF0_CLODC rbh
Radical SAM superfamily protein {ECO:0000313|EMBL:EQE67647.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
putative radical SAM-superfamily protein
NECEvent2014_2_3_scaffold_27_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16662..17855
DNA (1194bp) protein (398aa)
Anaerobic nitric oxide reductase flavorubredoxin (FlRd) (FlavoRb) n=210 Tax=Clostridium difficile RepID=Q18B19_CLOD6 rbh
anaerobic nitric oxide reductase flavorubredoxin
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EHJ30632.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_27_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17859..18026)
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T2VTA1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS85832.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_27_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18067..19209)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=68 Tax=Clostridium difficile RepID=G6BVY0_CLODI rbh
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CBE03199.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_27_20
unknown

Not on your lists

comp(19383..19496)
DNA (114bp) protein (38aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_27_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19713..20504)
DNA (792bp) protein (264aa)
Uncharacterized protein n=134 Tax=Clostridium difficile RepID=Q18B14_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77482.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_27_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20508..20837)
DNA (330bp) protein (110aa)
PadR-family transcriptional regulator n=185 Tax=Clostridium difficile RepID=C9XNN0_CLODC
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CCK89940.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_27_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21321..21734)
DNA (414bp) protein (138aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=204 Tax=Clostridium difficile RepID=MGSA_CLOD6
mgsA; methylglyoxal synthase
NECEvent2014_2_3_scaffold_27_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21775..22905)
DNA (1131bp) protein (377aa)
Rod shape-determining protein n=25 Tax=Clostridium difficile RepID=C9XNM8_CLODC rbh
rod shape-determining protein
Rod shape-determining protein {ECO:0000313|EMBL:CKG95238.1}; Rod shape-determining protein MrdB {ECO:0000313|EMBL:CEJ97722.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
NECEvent2014_2_3_scaffold_27_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22990..23274)
DNA (285bp) protein (95aa)
Cell division topological specificity factor n=219 Tax=Clostridium difficile RepID=MINE_CLOD6
cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
NECEvent2014_2_3_scaffold_27_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23292..24089)
DNA (798bp) protein (266aa)
Site-determining protein n=219 Tax=Clostridium difficile RepID=C9XNM6_CLODC rbh
septum site-determining protein (cell division inhibitor)
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
NECEvent2014_2_3_scaffold_27_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24113..24796)
DNA (684bp) protein (228aa)
Probable septum site-determining protein MinC n=190 Tax=Clostridium difficile RepID=MINC_CLOD6 rbh
minC; Cell division regulator (septum placement)
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_27_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24894..27872)
DNA (2979bp) protein (993aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin binding transpeptidase domain protein n=119 Tax=Clostridium difficile RepID=T2TM04_CLODI rbh
Penicillin binding transpeptidase domain protein {ECO:0000313|EMBL:EQG77528.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
NECEvent2014_2_3_scaffold_27_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27884..28372)
DNA (489bp) protein (163aa)
Rod shape-determining protein MreD n=56 Tax=Clostridium difficile RepID=T2U341_CLODI rbh
putative permease
Rod shape-determining protein MreD {ECO:0000313|EMBL:EQG77711.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_27_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28387..29280)
DNA (894bp) protein (298aa)
Cell shape-determining protein MreC n=116 Tax=Clostridium difficile RepID=Q18B04_CLOD6 rbh
mreC; Rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
Displaying items 1-30 of 102 in total

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