ggKbase home page

NECEvent2014_2_3_scaffold_27_13

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(11945..12256)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=221 Tax=Clostridium difficile RepID=RL21_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 202
  • Evalue 2.30e-49
rplU; 50S ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 202
  • Evalue 6.40e-50
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 202
  • Evalue 3.20e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 312
ATGTACGCTATAGTAAAGACTGGTGGAAAGCAATATAAAGTTTCTGAAGGTGATGTATTATTCGTTGAAAAATTAGAAGCTAACGCAGGTGATGTTGTTACTTTAAACGAAGTATTAGCTTGCTCTAAAGATGGAGAATTAAAATTAGGTTCTCCAGTAGTAGAAGGAGCATCTGTTCAAGCTAAAGTTGTTGAACAAGGTAAAGCTAAGAAAGTTATAGTTTTCAAGTATAAAGCAAAAAAAGATTACAGAAGAAAACAAGGACATCGTCAATCATACACTAAGATAGTTGTAGAAAAAATAAACGCTTAG
PROTEIN sequence
Length: 104
MYAIVKTGGKQYKVSEGDVLFVEKLEANAGDVVTLNEVLACSKDGELKLGSPVVEGASVQAKVVEQGKAKKVIVFKYKAKKDYRRKQGHRQSYTKIVVEKINA*