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NECEvent2014_2_3_scaffold_27_32

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(30421..31080)

Top 3 Functional Annotations

Value Algorithm Source
UPF0758 protein CD630_11440 n=42 Tax=Clostridium difficile RepID=Y1144_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 428
  • Evalue 5.40e-117
  • rbh
radC; DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 428
  • Evalue 1.50e-117
DNA repair RadC family protein {ECO:0000313|EMBL:EQG77888.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 428
  • Evalue 7.60e-117

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 660
ATGGCACCAGAGGAAAGACCCAGAGAAAAGATGCTTGCCAAAGGCGTAAAAAGCTTATCAAATGCTGAGTTGTTGGCTATACTTTTAAGAACTGGCAACAAGAATAAAAATGCTATTGAATTAGCCAACTATATAATAAATAGAGATATTCAGGGTATTAGACATTTAGAAGATATGACAATAGAGGAGCTGTGTAATATAGATGGAATTGGGTTATCAAAATCAACCCAAATTAAAGCAGCTTTAGAACTAGGCTCTAGAGTAGCTAGTTTTAAACCTATAAAGTATAAAATAATGAATCCTTGGGATATACAGAGGTATTATATGGATAGCCTAAGGTATTTAAAAAAAGAGGTTTTTAAAGCGGTTCTTTTAAACACAAAAAATGAGATAATATCTGATGTAGATGTATCTATAGGGACTTTAAGCTCGTCATTAGTCCATCCAAGAGAGGTTTTTAAAGAAGCTATAAGAAGAAGTGCAAGTAAGATAATAGTGATGCATAATCACCCTTCAGGAAGTGTAGAACCATCAAGAGAAGATAAAAATATCACATCAAGACTTATTAAATGTGGAGAAATAATTGGAATAGAAATAATAGACCATATAATTATTGGAGATGGATTATACTTTAGCTTTAAAGAAAATATGATAATTTGA
PROTEIN sequence
Length: 220
MAPEERPREKMLAKGVKSLSNAELLAILLRTGNKNKNAIELANYIINRDIQGIRHLEDMTIEELCNIDGIGLSKSTQIKAALELGSRVASFKPIKYKIMNPWDIQRYYMDSLRYLKKEVFKAVLLNTKNEIISDVDVSIGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDKNITSRLIKCGEIIGIEIIDHIIIGDGLYFSFKENMII*