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NECEvent2014_2_3_scaffold_129_20

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 17952..19118

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=213 Tax=Clostridium difficile RepID=C9XSQ7_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 388.0
  • Bit_score: 754
  • Evalue 4.50e-215
  • rbh
sigA1; RNA polymerase sigma factor SigA1 (sigma-43) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 388.0
  • Bit_score: 754
  • Evalue 1.60e-215
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 388.0
  • Bit_score: 754
  • Evalue 8.20e-215

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1167
GTGGAAAATAAATCGAATAAAAAAGAGTTAAAAAAGGTTACTGCTAAGACATTAATAGAAAAAGGAAAAAAGCAAGGTTCTCTGACACTTGCAGAGATAATGGAAGCTTTTTCGGAGACTGAACTTGATAAGGATCAAGTAGAAAATCTTTATGAGACTTTAGGAAATTTGGGAATAGAAATAACAGAAACAAAAAACTATAAAGCTGATATAGATTTTTCGGTTGCTGATGACGATTTAAGTATAGGCCACTTAGATGAAGATGCAGAGGCAATTTCACATGATGACTCTTCTGCAATAGAAATAGAAACTGTGGATTTATCTTTACCAAAAGGGATAAGTATAGATGACCCTGTAAGAATGTACTTAAAAGAAATAGGAAAAATTCCTCTACTTAAACCACATGAAGAAGTAGAATTTGCTAGAAGGATGCACGAAGGTGATGAGATAGCAAAACAAAGGTTAGTTGAAGCAAACTTAAGACTAGTTGTAAGTATAGCAAAAAGATATGTAGGAAGAGGTATGCTTTTCTTGGATTTAATACAAGAGGGAAATTTAGGTCTTATAAAAGCAGTCGAAAAATTTGACTATACAAAAGGATATAAGTTTAGTACTTATGCAACATGGTGGATAAGACAAGCTATAACACGTGCTATTGCAGACCAAGCTAGAACTATAAGAATACCAGTTCATATGGTAGAGACTATAAATAAGCTAATAAGAGTATCAAGACAACTACTTCAAGAACTTGGAAGAGATCCAAAACCAGAAGAAATTGCAAAAGAAATGGAAATGACAGAAGATAAAGTAAGAGAAATAATGAAAATAGCTCAAGACCCTGTGTCTTTAGAAACACCAATAGGAGAAGAAGAAGATAGCCATTTAGGTGACTTTATTCCAGATGATGATGCTCCAGCCCCAGCAGAGGCAGCAGCATATTCTTTATTAAAAGAACAAATAGAAGATGTACTTGGTTCATTAAATGATAGAGAACAAAAAGTATTAAAGCTTAGATTTGGTCTTGAGGATGGTAGAGCCAGAACTCTTGAGGAAGTTGGAAAAGAGTTTGATGTAACTAGAGAGAGAATAAGACAGATAGAAGCAAAAGCACTAAGAAAACTAAGACATCCAAGTAGATCAAAAAAACTTAGAGATTATTTAGACTAA
PROTEIN sequence
Length: 389
VENKSNKKELKKVTAKTLIEKGKKQGSLTLAEIMEAFSETELDKDQVENLYETLGNLGIEITETKNYKADIDFSVADDDLSIGHLDEDAEAISHDDSSAIEIETVDLSLPKGISIDDPVRMYLKEIGKIPLLKPHEEVEFARRMHEGDEIAKQRLVEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGRDPKPEEIAKEMEMTEDKVREIMKIAQDPVSLETPIGEEEDSHLGDFIPDDDAPAPAEAAAYSLLKEQIEDVLGSLNDREQKVLKLRFGLEDGRARTLEEVGKEFDVTRERIRQIEAKALRKLRHPSRSKKLRDYLD*