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NECEvent2014_2_3_scaffold_129

Alias: 172_003_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_129_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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74..1543
DNA (1470bp) protein (490aa)
Putative peptidoglycan binding domain protein n=56 Tax=Clostridium difficile RepID=T3HGF7_CLODC rbh
putative hydrolase
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EQI00649.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="
NECEvent2014_2_3_scaffold_129_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1608..2201
DNA (594bp) protein (198aa)
Bacterial regulatory , Fis family protein n=180 Tax=Clostridium difficile RepID=C9XQX3_CLODC rbh
sigma-54-dependent transcriptional regulator
Putative sigma-54-dependent transcriptional regulator {ECO:0000313|EMBL:CCL29516.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
NECEvent2014_2_3_scaffold_129_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2338..3741
DNA (1404bp) protein (468aa)
TPR repeat family protein n=16 Tax=Clostridium difficile RepID=T2U2F6_CLODI rbh
Multiprotein complex assembly protein {ECO:0000313|EMBL:CKH03718.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
multiprotein complex assembly protein
NECEvent2014_2_3_scaffold_129_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3923..4294
DNA (372bp) protein (124aa)
LrgA family protein n=211 Tax=Clostridium difficile RepID=C9XRB2_CLODC
hypothetical protein
Putative transporter, LrgA family {ECO:0000313|EMBL:CCL29518.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostri
NECEvent2014_2_3_scaffold_129_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4287..4976
DNA (690bp) protein (230aa)
LrgB-like family protein n=109 Tax=Clostridium difficile RepID=C9XRB3_CLODC rbh
hypothetical protein
Putative transporter, LrgB family {ECO:0000313|EMBL:CCL29520.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostri
NECEvent2014_2_3_scaffold_129_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5496..6362
DNA (867bp) protein (289aa)
Uncharacterized protein n=215 Tax=Clostridium difficile RepID=G6B9V0_CLODI rbh
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EQE66589.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_129_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6604..7413
DNA (810bp) protein (270aa)
MORN repeat family protein n=178 Tax=Clostridium difficile RepID=T3HLR7_CLODC rbh
putative MORN repeat-containing protein
MORN repeat family protein {ECO:0000313|EMBL:EQI85714.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
NECEvent2014_2_3_scaffold_129_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7557..8621
DNA (1065bp) protein (355aa)
Cysteine-rich secretory family protein n=34 Tax=Clostridium difficile RepID=T2U2G2_CLODI rbh
putative Ca++-chelating serine protease,SCP-likeextracellular domain protein
Copper amine oxidase-like protein {ECO:0000313|EMBL:CKH03879.1}; Putative Ca++-chelating serine protease,SCP-likeextracellular domain protein {ECO:0000313|EMBL:CEJ98031.1}; TaxID=1496 species="Bacteri
NECEvent2014_2_3_scaffold_129_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8649..9368
DNA (720bp) protein (240aa)
Polysaccharide deacetylase family protein n=134 Tax=Clostridium difficile RepID=T3HHH8_CLODC rbh
putative exported polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EQE66618.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_129_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9392..9976
DNA (585bp) protein (195aa)
pabA; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II (EC:2.6.1.85 4.1.3.27)
Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:CAJ68310.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CAJ68310.1};; EC=4.1.3.27 {ECO:0000313|EMBL:CAJ68310.1};;
Glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein n=36 Tax=Clostridium difficile RepID=T3HG68_CLODC rbh
NECEvent2014_2_3_scaffold_129_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9969..11327
DNA (1359bp) protein (453aa)
pabB; Para-aminobenzoate synthase component I (EC:2.6.1.85)
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:CEJ98034.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CEJ98034.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococc
Para-aminobenzoate synthase component I n=37 Tax=Clostridium difficile RepID=Q18BW5_CLOD6 rbh
NECEvent2014_2_3_scaffold_129_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11317..12060
DNA (744bp) protein (248aa)
Aminotransferase class IV family protein n=150 Tax=Clostridium difficile RepID=C9XRV6_CLODC rbh
aminodeoxychorismate lyase
Aminotransferase class IV family protein {ECO:0000313|EMBL:EQG77449.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto
NECEvent2014_2_3_scaffold_129_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12094..12795
DNA (702bp) protein (234aa)
Uncharacterized protein n=77 Tax=Clostridium difficile RepID=T3HJ57_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77693.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_129_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12821..13393
DNA (573bp) protein (191aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=217 Tax=Clostridium difficile RepID=GCH1_CLOD6 rbh
NECEvent2014_2_3_scaffold_129_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13457..14248
DNA (792bp) protein (264aa)
folP; Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
Dihydropteroate synthase n=158 Tax=Clostridium difficile RepID=T3HG74_CLODC rbh
NECEvent2014_2_3_scaffold_129_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14259..14624
DNA (366bp) protein (122aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase {ECO:0000313|EMBL:EQG77811.1}; EC=4.1.2.25 {ECO:0000313|EMBL:EQG77811.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pept
Dihydroneopterin aldolase n=78 Tax=Clostridium difficile RepID=T3HL65_CLODC
NECEvent2014_2_3_scaffold_129_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14617..15123
DNA (507bp) protein (169aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase {ECO:0000313|EMBL:CAJ68317.1}; EC=2.7.6.3 {ECO:0000313|EMBL:CAJ68317.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clo
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=140 Tax=Clostridium difficile RepID=T3HLS6_CLODC rbh
NECEvent2014_2_3_scaffold_129_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15104..15889
DNA (786bp) protein (262aa)
aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:CCK90250.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CCK90250.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostre
Phospho-2-dehydro-3-deoxyheptonate aldolase n=190 Tax=Clostridium difficile RepID=T3HJ61_CLODC rbh
NECEvent2014_2_3_scaffold_129_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16108..17934
DNA (1827bp) protein (609aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1151268 species="Bacteria; Firmicutes;
DNA primase n=200 Tax=Clostridium difficile RepID=T3HHB4_CLODC rbh
dnaG; DNA primase
NECEvent2014_2_3_scaffold_129_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17952..19118
DNA (1167bp) protein (389aa)
RNA polymerase sigma factor SigA n=213 Tax=Clostridium difficile RepID=C9XSQ7_CLODC rbh
sigA1; RNA polymerase sigma factor SigA1 (sigma-43)
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostri
NECEvent2014_2_3_scaffold_129_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19283..19972
DNA (690bp) protein (230aa)
Uncharacterized protein n=169 Tax=Clostridium difficile RepID=T3HKY7_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE03761.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_129_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19986..21083
DNA (1098bp) protein (366aa)
Uncharacterized protein n=149 Tax=Clostridium difficile RepID=U3W909_CLODI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68322.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_129_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21143..21718
DNA (576bp) protein (192aa)
NADPH-dependent FMN reductase family protein n=27 Tax=Clostridium difficile RepID=T3HIZ7_CLODC rbh
wrbA; putative flavodoxin protein
Putative flavodoxin protein {ECO:0000313|EMBL:CEJ98046.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_129_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21778..22245)
DNA (468bp) protein (156aa)
Pyridoxamine 5'-phosphate oxidase family protein n=206 Tax=Clostridium difficile RepID=T2TMI5_CLODI rbh
5-nitroimidazole reductase
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EQI85731.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
NECEvent2014_2_3_scaffold_129_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22631..23107)
DNA (477bp) protein (159aa)
Uncharacterized protein n=196 Tax=Clostridium difficile RepID=G6B9W9_CLODI rbh
putative phosphohydrolase, HD superfamily
HD domain protein {ECO:0000313|EMBL:EQE66592.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile C
NECEvent2014_2_3_scaffold_129_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23227..24318)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=25 Tax=Clostridium difficile RepID=T3BYN6_CLODI rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ68326.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_129_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24311..24700)
DNA (390bp) protein (130aa)
Bacterial regulatory s, gntR family protein n=210 Tax=Clostridium difficile RepID=C9XSY4_CLODC
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQE66624.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
NECEvent2014_2_3_scaffold_129_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24892..25338
DNA (447bp) protein (149aa)
Uncharacterized protein n=57 Tax=Clostridium difficile RepID=T3HK45_CLODC rbh
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77469.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_129_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25623..26327
DNA (705bp) protein (235aa)
Transcriptional regulatory family protein n=176 Tax=Clostridium difficile RepID=T3HKC8_CLODC rbh
Two-component response regulator
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQI85736.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_129_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26314..27558
DNA (1245bp) protein (415aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
His Kinase A domain protein n=46 Tax=Clostridium difficile RepID=T2U1E2_CLODI rbh
Two-component sensor histidine kinase
Displaying items 1-30 of 36 in total

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