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NECEvent2014_2_3_scaffold_129_27

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(24311..24700)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, gntR family protein n=210 Tax=Clostridium difficile RepID=C9XSY4_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 129.0
  • Bit_score: 249
  • Evalue 1.60e-63
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 129.0
  • Bit_score: 249
  • Evalue 4.40e-64
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQE66624.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 129.0
  • Bit_score: 249
  • Evalue 2.20e-63

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 390
ATGGTTTTAAATTTAGATTTTAATAGTGATAAATCTATTTATGTACAAATTAAAGAAGAAATAACTAAGGCTATAGCTTCAGGAGAATTGAAAATAAATGAATCACTTCCATCTGTAAGAAGTATGGCTGAAAATATTGGTGTAAATTTACATACAGTGAACAAATCCTACAATGAATTAAAAGAAGAGGGATTCTTAAATATTGATAGAAGAAAAGGTGCTATTGTAGCTCAACTACCAATGAAAATAGATAATACAACTCGTCAAAAAAATAAACTTGACTTGGAATTATTGGTGGCAAAATCTTATTTATCAGGTATTAGTAAAGAAGAATTTTTGTCACTAAGTTCAAGTTTATTTGACAAGTATGAGGTGAAATATTATGAGTAA
PROTEIN sequence
Length: 130
MVLNLDFNSDKSIYVQIKEEITKAIASGELKINESLPSVRSMAENIGVNLHTVNKSYNELKEEGFLNIDRRKGAIVAQLPMKIDNTTRQKNKLDLELLVAKSYLSGISKEEFLSLSSSLFDKYEVKYYE*