ggKbase home page

NECEvent2014_2_3_scaffold_133_35

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(31556..34102)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system, permease n=25 Tax=Clostridium difficile RepID=Q181I5_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 848.0
  • Bit_score: 1638
  • Evalue 0.0
  • rbh
ABC transporter permease {ECO:0000313|EMBL:CKG68803.1}; ABC-type transport system, permease {ECO:0000313|EMBL:CEK00301.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 848.0
  • Bit_score: 1638
  • Evalue 0.0
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 848.0
  • Bit_score: 1638
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2547
ATGAACATTTTTAACAAAGTTGCTCTGCAAGGATTGAAAAAGAATCGTACTCGAACTCTTGTAACAATTATAGGAGTTGTTCTGTCAGCTGCTATGATTACAGCAGTTACTACCTTTGGAGTTTCTTTGATGAACTATATGACAAATGGAGCTATTATAAAATATGGTGATTGGCATGTCCAGTTTTTGGATGTGGATTCTTCTTTTGTACAGGAACAAAGAGTCAATGATGAAGTTGCAAATACTGCAACATTTGAAAATATTGGCTATGCAACACTTGAAGGTAACAGAAATCCAGATAAACCATATCTTTTTATTGCTGGATTTAGCAAAGAAGCTTTTGATACTTTGCCTATAACTTTAATTTCTGGAAGATTACCTGAAAATAGTAGAGAGATTCTTGTTTCAAGTAAAGTTGCGACAGATGGTGGTGTCAAATTTGCAGTAGGTGATACTATTTCTTTGGATGTAGGGAAACGAATGAGTGAAAATGAAAAGCTTGGTCAGAGTGACCCATACACTGCTGGGAGTGAAGTTTTTGTGCCACAGGATAAGAAAACTTATACAGTTGTGGGTATCTGTAGAAAGCCCGTATTTGAAGAATCTTCTGCACCAGGATATACCTTGATAACCAAAGAAGATAAACAAGTCAAGACTGACAGTCTTAGCCTTTTTGTCACATTGAAAAATCCACATCAGATTCGCTCTTACACAAGTAGCACTAAAGACCATGCTTCCATTTTCAATGACAATGTGTTGCGATTCATAGGTGTCTCTGATAACAATTTGTTCAATATGTTTTTGTACTCGGTTGGTGGCATTGTGCTTGCCATAATCATGCTAGGCTCAATTTTTCTAATATATAATTCATTTAACATGTCATTGAACGAGCGAACACATCAATTTGGAATACTTTCATCTGTTGGAGCTACAGCAAAACAGTTACGAAATTCGGTGCTATTTGAAGGAATTTGCATTGGTGCGATTGGTATACCAATTGGTGTTGCAATCGGTATAGTCAGTATTGGACTTGTGATTTCTGTCATAGCTAAAAACTTTGCAAATATTCTCTATGTAAACGTTCCGTTGACATTAACATTGTCTATCCCTGCAATCATCGTTGCAGCAGTGGTAAGTATGGTTACAATCTTAATTTCTGCTTACATACCAGCAAGAAAGGCTGCCAACACACCAGTGATGGAGTGTATTCGTCAGACAAATGAGGTAAAAATTGAATCTAAATCTGTGAAGACATCAAAACTAACACAGCGAGTTTATGGTCTTGAGGGAGTTCTTGCTATGAAAAACTTTAAAAGAAACAAGAAACGTTATCGAAGTATTGTATTGTCGCTTGTTTTAAGCATAGTTCTATTTATATCTACAAGTGCTTTAGTAGCAGACCTAAAACAGATGTCAAATCAGAGGTCAGAGGTTACTGACCAGGATATTATTTTTTCTACACAAGGTATGAAAGACAACGAAATGTTGAAGCTTTACGATAAGCTAAAAACTGCAAATGGTGTTTACGAAGGTTTGTATCAGAAACTTATGACCTATTCATGTGTTGCCAAAGTAAGTGAGCTTACAGACGATTATTTGAACTATGAGGGTTCACATTCTATGAGTGAAATGCTTGAATTACCAGTAGATATGCAATTTCTTGATGATAGAACTTATCTGAATATTATTAAAAGTCTCGGATTACCAGCAGAAGAATATACTGGACAAAATGCAAAACTGATTGCTGTTTCTATGGTAACAAAGGATAATAATATTATTGATATTTTCAACAGTTCTTCTATGAATGTTAGCCTCACTCCTGAAACTAATGGCAAGTTGGAGATACCTGAGAGACAAAATGTGAATATTTCATTTGTCAAAGTAGTGCCACCGGATTCTCCTCCAGGAATCAGAAGTTCAGATGTGAAGAAAGCAAGCTTCAGAGTATTGGCTCCTTATTCAGCCAAAGATAAGTTTGAGATTCCTGGCGTTTCTACAGGAATTGAAAGTTTAAGCTTTCAATCGAAAAATCCTACTCAGTCAGTTGCAGAAATGGAGCAAATTATTGAGAGTGAGGGAGTTACGAATGAGTACAATCTGTACAATATGTATGGAATGATGGATGAGAACCGTAATTACATTTTTATTGCCAATGTGTTTGCTTATACTTTCATAATTATGATTTCTCTGATTTCGATTGCCAATGTGTTTAATACAATTTCAACTAATATTAAGTTACGTCGTAGAGAACTTGCCATGCTTCGCTCTGTAGGAATGTCTGAGCATGATTTCCAAAAGATGATGAATTTTGAGTGTGCCTTTTATGGCATGAGAGCATTGTTCTTTGGACTTCCTATAGCAGTAATTTCTTCATGGCTAATTCATAAAGTAATGGTTACAGATGATATTGATTTTGTGATTCCATGGTTTAGTATTGGAATTAGTATATTTAGTGTTTTATTTATAGTATTTATTACAATGTTGTATACTATTAATAAGATAAAAAAAGAAAATATTATTGATGCACTTCGTGATGACATGGCTTAA
PROTEIN sequence
Length: 849
MNIFNKVALQGLKKNRTRTLVTIIGVVLSAAMITAVTTFGVSLMNYMTNGAIIKYGDWHVQFLDVDSSFVQEQRVNDEVANTATFENIGYATLEGNRNPDKPYLFIAGFSKEAFDTLPITLISGRLPENSREILVSSKVATDGGVKFAVGDTISLDVGKRMSENEKLGQSDPYTAGSEVFVPQDKKTYTVVGICRKPVFEESSAPGYTLITKEDKQVKTDSLSLFVTLKNPHQIRSYTSSTKDHASIFNDNVLRFIGVSDNNLFNMFLYSVGGIVLAIIMLGSIFLIYNSFNMSLNERTHQFGILSSVGATAKQLRNSVLFEGICIGAIGIPIGVAIGIVSIGLVISVIAKNFANILYVNVPLTLTLSIPAIIVAAVVSMVTILISAYIPARKAANTPVMECIRQTNEVKIESKSVKTSKLTQRVYGLEGVLAMKNFKRNKKRYRSIVLSLVLSIVLFISTSALVADLKQMSNQRSEVTDQDIIFSTQGMKDNEMLKLYDKLKTANGVYEGLYQKLMTYSCVAKVSELTDDYLNYEGSHSMSEMLELPVDMQFLDDRTYLNIIKSLGLPAEEYTGQNAKLIAVSMVTKDNNIIDIFNSSSMNVSLTPETNGKLEIPERQNVNISFVKVVPPDSPPGIRSSDVKKASFRVLAPYSAKDKFEIPGVSTGIESLSFQSKNPTQSVAEMEQIIESEGVTNEYNLYNMYGMMDENRNYIFIANVFAYTFIIMISLISIANVFNTISTNIKLRRRELAMLRSVGMSEHDFQKMMNFECAFYGMRALFFGLPIAVISSWLIHKVMVTDDIDFVIPWFSIGISIFSVLFIVFITMLYTINKIKKENIIDALRDDMA*