ggKbase home page

NECEvent2014_2_3_scaffold_46_23

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(30069..31850)

Top 3 Functional Annotations

Value Algorithm Source
TraG/TraD family protein n=24 Tax=Clostridium difficile RepID=G6B3U9_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 593.0
  • Bit_score: 1185
  • Evalue 0.0
  • rbh
TRAG family protein {ECO:0000313|EMBL:CKH14388.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (C similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 593.0
  • Bit_score: 1185
  • Evalue 0.0
putative conjugative transfer proteinTn1549-like, CTn5-Orf5 similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 579.0
  • Bit_score: 1157
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1782
ATGATAGATAAGATACTAAAAGACATCAAAGGCTTATTTAAGGTGCAAGATAAGGCAAAGTTTCTAAAGCAGAACATTCCCTATCTTGCATTTTTCTATGTTGGCAATATCTTTTCTCATCATGTAAGAGCATATACTGGTGGCGATGTAATAGACAAAATATTTCAAGGTATATTGGAACTTAACACCATGAGCTTTCTTCCAAGTTTTCATCCAACTGATATTCTAATAGGCGTAGGAGTAGCTACTTTAATCAAATTCATTGCCTATACAAAAGGGAAAAATGCGAAAAAGTTTAGGCAGGGAAAAGAGTATGGCTCGGCAAGATGGGGAACTAGAAAAGATATTGAGCCGTACATTGATGAAAAGTTTCAAAACAATATCTTGCTAACGCAAACAGAACGATTAACTATGAATGGTAGACCGAAAAATCCCAAGTATGCAAGAAATAAAAATGTACTTGTCATAGGAGGATCTGGAAGTGGCAAGACAAGGTTTTATGTCAAGCCGAACCTAATGCAAATGCACAGTAGCTATTGCGTAACAGATCCAAAGGGAACGATAGTCCTTGAGTGTGGCAAAATGCTTGAAGATAACGGATATGAGATAAAAATCCTTAATACCATTAACTTTAAAAAGTCTATGAAATACAATCCATTCGCCTACCTCCGCAGTGAAAAAGACATACTTAAATTGGTGCAGACAATCATTGCAAACACTAAGGGAGAGGGTGAAAAAGCGGGGGAAGATTTTTGGGTCAAAGCCGAAAAACTCTATTATACAGCTCTGATTGGATATATCTTCTATGAAGCTCCAAGGGAAGAAAAGAACTTTGCAACACTCCTTGATATGATAGACGCTTCAGAAGTTAGAGAAGATGATGAAACATATATGAATCCTATTGATAGGTTATTTGAAGCATTGGAAAAGAAAGAACCTACGCACTTTGCAGTAAAGCAATATAAAAAATACAAACTTGCTGCCGGAAAAACAGCGAAATCTATTCTTATCTCTTGTGGTGCAAGGCTTGCTCCATTTGATATTAGGGAACTTAGGGACTTGATGGGGGAAGATGAACTTGAGCTTGATACACTCGGAGATAGAAAAACGGCACTCTTTGTTATTATCTCTGATACAGATGATACCTTTAACTTTGTAGTGTCTATTATGTATTCGCAGTTATTTAATCTCTTATGTGATAAGGCAGATGATGTATATGGCGGACGATTACCTGTCCATGTGAGGTGTCTACTTGATGAGTTCGCTAATATCGGCTTAATTCCTAAGTTTGAGAAGTTAATTGCAACAATCCGTTCAAGAGAGATTTCAGCAAGTATAATACTTCAAGCACAATCTCAGTTAAAAGCAATCTACAAAGATAATGCAGATACAATTGTAGGTAATTGTGATAGCACCTTGTTTCTTGGCGGGAAGGAAAAGACTACATTAAAAGAGCTTTCTGAAACACTTGGAAAGGAAACGATAGACCTTTACAATACCTCGGAAACAAGAAGCAATCAAAAGAGCTTTGGATTGAATTATCAAAAGACAGGAAAGGAGCTAATGAGCCAAGATGAGATAACAGTAATGGACGGTGGAAAATGTATATTTCAGCTTAGAGGTGTTCGACCTTTTCTATCAGATAAATACGATATTACAAAGCATAAGAATTACAAGCTCCTTGAGGACTATGACAAGAGGAATTTGTTTGATATAGAGAGCTACATTAAGCGTAAAGGGAAAGTGAAAATGAATAGACATACTGTAATTACAAGATTGTAA
PROTEIN sequence
Length: 594
MIDKILKDIKGLFKVQDKAKFLKQNIPYLAFFYVGNIFSHHVRAYTGGDVIDKIFQGILELNTMSFLPSFHPTDILIGVGVATLIKFIAYTKGKNAKKFRQGKEYGSARWGTRKDIEPYIDEKFQNNILLTQTERLTMNGRPKNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYCVTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYLRSEKDILKLVQTIIANTKGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNPIDRLFEALEKKEPTHFAVKQYKKYKLAAGKTAKSILISCGARLAPFDIRELRDLMGEDELELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPVHVRCLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKAIYKDNADTIVGNCDSTLFLGGKEKTTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGGKCIFQLRGVRPFLSDKYDITKHKNYKLLEDYDKRNLFDIESYIKRKGKVKMNRHTVITRL*