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NECEvent2014_2_3_scaffold_46

Alias: 172_003_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_46_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

301..651
DNA (351bp) protein (117aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=G6B3X1_CLODI
putative conjugative transposon proteinTn1549-like, CTn5-Orf29
Putative conjugative transposon protein Tn1549-like, CTn5-Orf29 {ECO:0000313|EMBL:CAJ68744.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
NECEvent2014_2_3_scaffold_46_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

657..1988
DNA (1332bp) protein (444aa)
Relaxase/mobilization nuclease domain protein n=4 Tax=Clostridium difficile RepID=T2TZN8_CLODI rbh
endonuclease relaxase
Putative endonuclease relaxase Tn1549-like,CTn5-Orf28 {ECO:0000313|EMBL:CAJ68743.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" s
NECEvent2014_2_3_scaffold_46_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2024..2830)
DNA (807bp) protein (269aa)
Putative conjugative transposon protein Tn1549-like, CTn5-Orf27 n=4 Tax=Clostridium difficile RepID=Q187H8_CLOD6 rbh
putative conjugative transposon proteinTn1549-like, CTn5-Orf27
Putative conjugative transposon proteinTn1549-like, CTn5-Orf27 {ECO:0000313|EMBL:CEK00074.1}; Uncharacterised protein {ECO:0000313|EMBL:CKH14884.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridi
NECEvent2014_2_3_scaffold_46_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2820..3281)
DNA (462bp) protein (154aa)
Uncharacterized protein n=11 Tax=Firmicutes RepID=R3JFV7_ENTFL rbh
putative conjugative transposon proteinTn1549-like, CTn5-Orf26
Putative conjugative transposon proteinTn1549-like, CTn5-Orf26 {ECO:0000313|EMBL:CEK00075.1}; Uncharacterised protein {ECO:0000313|EMBL:CKH14868.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridi
NECEvent2014_2_3_scaffold_46_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3309..4376)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=10 Tax=Firmicutes RepID=C9YMJ1_CLODR rbh
putative conjugative transposon proteintn1549-like, CTn5-Orf25
Conjugative transposon protein {ECO:0000313|EMBL:CKH14845.1}; Putative conjugative transposon proteintn1549-like, CTn5-Orf25 {ECO:0000313|EMBL:CEK00076.1}; TaxID=1496 species="Bacteria; Firmicutes; Cl
NECEvent2014_2_3_scaffold_46_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4373..5995)
DNA (1623bp) protein (541aa)
RecF/RecN/SMC N terminal domain protein n=4 Tax=Clostridium difficile RepID=T2TZ41_CLODI rbh
putative DNA recombination proteinTn1549-like,CTn5-Orf24
Conjugative transposon DNA recombination protein {ECO:0000313|EMBL:CKH14828.1}; Putative DNA recombination proteinTn1549-like,CTn5-Orf24 {ECO:0000313|EMBL:CEK00077.1}; TaxID=1496 species="Bacteria; Fi
NECEvent2014_2_3_scaffold_46_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6198..6428)
DNA (231bp) protein (77aa)
Transcriptional regulator, HTH-type Tn1549-like,CTn5-Orf23 n=11 Tax=Firmicutes RepID=Q187H7_CLOD6
HTH-type transcriptional regulator
Transcriptional regulator, HTH-type Tn1549-like,CTn5-Orf23 {ECO:0000313|EMBL:CAJ68738.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium
NECEvent2014_2_3_scaffold_46_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6568..7227)
DNA (660bp) protein (220aa)
Putative single-strand DNA-binding protein Tn1549-like, CTn5-Orf22 n=4 Tax=Clostridium difficile RepID=Q187H5_CLOD6 rbh
putative single-strand DNA-binding proteinTn1549-like, CTn5-Orf22
Putative single-strand DNA-binding proteinTn1549-like, CTn5-Orf22 {ECO:0000313|EMBL:CEK00079.1}; Uncharacterised protein {ECO:0000313|EMBL:CKH14739.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostr
NECEvent2014_2_3_scaffold_46_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7270..16251)
DNA (8982bp) protein (2994aa)
Helicase conserved C-terminal domain protein n=19 Tax=Clostridium difficile RepID=T3S166_CLODI rbh
Putative DNA/RNA helicase Tn1549-like,CTn5-Orf21 {ECO:0000313|EMBL:CAJ68736.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
putative DNA/RNA helicaseTn1549-like,CTn5-Orf21
NECEvent2014_2_3_scaffold_46_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16364..17170)
DNA (807bp) protein (269aa)
Leucine carboxyl methyltransferase family protein n=4 Tax=Clostridium difficile RepID=T2TZU2_CLODI rbh
putative conjugative transposon proteinTn1549-like, CTn5-Orf19
Polyketide methyltransferase {ECO:0000313|EMBL:CKH14689.1}; Putative conjugative transposon proteinTn1549-like, CTn5-Orf19 {ECO:0000313|EMBL:CEK00081.1}; TaxID=1496 species="Bacteria; Firmicutes; Clos
NECEvent2014_2_3_scaffold_46_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17281..18327)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=32 Tax=Clostridium difficile RepID=G6B3W3_CLODI rbh
putative conjugative transposon protein DUF1016family, Tn1549-like, CTn5-Orf18
Uncharacterized protein {ECO:0000313|EMBL:EHJ33495.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_46_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18361..18546)
DNA (186bp) protein (62aa)
Transcriptional regulator, AbrB family Tn1549-like, CTn5-Orf17 n=32 Tax=Clostridium difficile RepID=Q187H2_CLOD6
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:CKH14636.1}; Transcriptional regulator, AbrB familyTn1549-like, CTn5-Orf17 {ECO:0000313|EMBL:CEK00083.1}; TaxID=1496 species="Bacteria; Firmicut
NECEvent2014_2_3_scaffold_46_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18630..20336)
DNA (1707bp) protein (569aa)
DNA topoisomerase n=4 Tax=Clostridium difficile RepID=Q187G8_CLOD6 rbh
type IA DNA topoisomerase
DNA topoisomerase protein, type IA,Tn1549-like,CTn5-Orf16 {ECO:0000313|EMBL:CAJ68732.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.
NECEvent2014_2_3_scaffold_46_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20432..22012)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=T2U213_CLODI rbh
Cell surface protein {ECO:0000313|EMBL:CKH14592.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (
cell surface protein
NECEvent2014_2_3_scaffold_46_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21993..22226)
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=T2TZT9_CLODI
putative conjugative transposon proteinTn1549-like, CTn5-Orf14
Putative conjugative transposon protein Tn1549-like, CTn5-Orf14 {ECO:0000313|EMBL:CAJ68730.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
NECEvent2014_2_3_scaffold_46_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22238..24400)
DNA (2163bp) protein (721aa)
NLP/P60 protein {ECO:0000313|EMBL:CKH14543.1}; EC=3.4.-.- {ECO:0000313|EMBL:CKH14543.1};; Putative cell wall hydrolaseTn1549-like,CTn5-Orf13 {ECO:0000313|EMBL:CEK00087.1}; TaxID=1496 species="Bacteria
Bacteriophage peptidoglycan hydrolase family protein n=4 Tax=Clostridium difficile RepID=T2TZ32_CLODI rbh
putative cell wall hydrolaseTn1549-like,CTn5-Orf13
NECEvent2014_2_3_scaffold_46_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24405..26834)
DNA (2430bp) protein (810aa)
Type IV secretion-system coupling DNA-binding domain protein n=3 Tax=Clostridium difficile RepID=T2TZM5_CLODI rbh
putative hydrolase Tn1549-like, CTn5-Orf12
Putative hydrolase Tn1549-like, CTn5-Orf12 {ECO:0000313|EMBL:CAJ68728.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_46_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27139..27399)
DNA (261bp) protein (87aa)
Putative conjugative transposon protein Tn1549-like, CTn5-Orf10 n=4 Tax=Clostridium difficile RepID=Q187G4_CLOD6
putative conjugative transposon proteinTn1549-like, CTn5-Orf10
Putative conjugative transposon protein Tn1549-like, CTn5-Orf10 {ECO:0000313|EMBL:CAJ68726.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
NECEvent2014_2_3_scaffold_46_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27417..28280)
DNA (864bp) protein (288aa)
Uncharacterized protein n=16 Tax=Clostridium difficile RepID=G6B3V4_CLODI rbh
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ33486.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_46_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28300..28515)
DNA (216bp) protein (72aa)
Maff2 family protein n=21 Tax=Clostridium difficile RepID=T2TZT4_CLODI
putative conjugative transposon proteinTn1549-like, CTn5-Orf8
Putative conjugative transposon protein Tn1549-like, CTn5-Orf8 {ECO:0000313|EMBL:CAJ68724.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
NECEvent2014_2_3_scaffold_46_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28519..28830)
DNA (312bp) protein (104aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=G6B3V2_CLODI
putative single-strand DNA-binding proteinTn1549-like, CTn5-Orf7
Conjugal transfer protein {ECO:0000313|EMBL:CKH14420.1}; Putative single-strand DNA-binding proteinTn1549-like, CTn5-Orf7 {ECO:0000313|EMBL:CEK00093.1}; TaxID=1496 species="Bacteria; Firmicutes; Clost
NECEvent2014_2_3_scaffold_46_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29039..29905)
DNA (867bp) protein (289aa)
Transcriptional regulator, AraC family Tn1549-like, CTn5-Orf6 n=38 Tax=Clostridium difficile RepID=Q187G0_CLOD6 rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family Tn1549-like, CTn5-Orf6 {ECO:0000313|EMBL:CAJ68722.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
NECEvent2014_2_3_scaffold_46_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30069..31850)
DNA (1782bp) protein (594aa)
TraG/TraD family protein n=24 Tax=Clostridium difficile RepID=G6B3U9_CLODI rbh
TRAG family protein {ECO:0000313|EMBL:CKH14388.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (C
putative conjugative transfer proteinTn1549-like, CTn5-Orf5
NECEvent2014_2_3_scaffold_46_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31847..32332)
DNA (486bp) protein (162aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2U206_CLODI rbh
putative conjugative transposon proteinTn1549-like, CTn5-Orf4
Putative ATPase of the AAA superfamily {ECO:0000313|EMBL:CKH14367.1}; Putative conjugative transposon proteinTn1549-like, CTn5-Orf4 {ECO:0000313|EMBL:CEK00096.1}; TaxID=1496 species="Bacteria; Firmicu
NECEvent2014_2_3_scaffold_46_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32334..33344)
DNA (1011bp) protein (337aa)
Putative conjugative transposon protein Tn1549-like, CTn5-Orf3 n=4 Tax=Clostridium difficile RepID=Q187F9_CLOD6 rbh
putative conjugative transposon proteinTn1549-like, CTn5-Orf3
Conjugative transposon protein {ECO:0000313|EMBL:CKH14341.1}; Putative conjugative transposon proteinTn1549-like, CTn5-Orf3 {ECO:0000313|EMBL:CEK00097.1}; TaxID=1496 species="Bacteria; Firmicutes; Clo
NECEvent2014_2_3_scaffold_46_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33445..33963)
DNA (519bp) protein (173aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=T2TZ23_CLODI rbh
putative conjugative transposon proteinTn1549-like, CTn5-Orf2
Putative conjugative transposon protein Tn1549-like, CTn5-Orf2 {ECO:0000313|EMBL:CAJ68718.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
NECEvent2014_2_3_scaffold_46_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34004..34285)
DNA (282bp) protein (94aa)
Putative membrane protein Tn1549-like,CTn5-Orf1 n=2 Tax=Clostridium difficile RepID=Q187F6_CLOD6
membrane protein
Putative membrane protein Tn1549-like,CTn5-Orf1 {ECO:0000313|EMBL:CAJ68717.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source=
NECEvent2014_2_3_scaffold_46_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34304..35938)
DNA (1635bp) protein (545aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=4 Tax=Clostridium difficile RepID=T2U0A9_CLODI rbh
Fusion of rumA/CD3393 and CD1844A
Fusion of rumA/CD3393 and CD1844A {ECO:0000313|EMBL:CEK00100.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_46_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36113..37873)
DNA (1761bp) protein (587aa)
pyk; Pyruvate kinase (PK) (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
Pyruvate kinase n=125 Tax=Clostridium difficile RepID=T3G1D8_CLODC rbh
NECEvent2014_2_3_scaffold_46_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37925..38884)
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase n=204 Tax=Clostridium difficile RepID=K6PF_CLOD6 rbh
6-phosphofructokinase
Displaying items 1-30 of 52 in total

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