ggKbase home page
Advanced Search
Search Help

NECEvent2014_2_3_scaffold_46_31

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(39093..42662)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2369
  • Evalue 0.0
DNA polymerase III alpha subunit n=141 Tax=Clostridium difficile RepID=C9XRY5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2369
  • Evalue 0.0
  • rbh
dnaE; DNA polymerase III DnaE similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2369
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3570
ATGAACAAAGATTTTGCTCATCTTCATGTACATACTGAGTATAGTTTACTTGATGGGTTTTCGAGGGTGAAAAAACTTATAAAAAGGGCTAAGGAACTAAACATGAGCTCAATAGCTATAACTGACCATGGTTGTATGTTTGGTGTTATAGATTTCTACAAAACAGCTATAAAAGAAGGAATAAAGCCAATTATAGGGTGTGAAGTCTATACAGCTGCACGTGGATTGAGAGATAAAGACCCAAACTATGACAAATATCAAGGACATTTAGTTCTGTTAGCTAAGAATATGGAAGGATATAAAAATTTAATAAAAATAGTTTCAACTTCATACGTAGAAGGTTTTTACTATAAGCCTAGAGTTGACATGGAAGAACTTAAAAAACATAACAAAGGGATTATAGCACTTTCTGCATGCCTTGCAGGAGATGTAGCACGTGCTTTAATGAATAGAAATTATGAAAAAGCAAAACAATTTGCTCTTGACTACAGAGACATATTTGGAGAAGAAAATTTCTTTTTGGAGATTCAAGATCACAATTTACCTGAGCAAAAAGAAGTAAACTCTGGTTTAGTAAAATTATCAAAAGAGACTGGTATACCACTAGTTGCTACTAATGATGTTCACTATGTAAATAAAGAAGATTCGAAAATACATGATGTACTTATGTGTATTCAAATGGGAAAAACATTAAATGACCCAAATAGAATGAGATTTGGTAGTGATGAGTTTTATTTAAAATCAAGAGAAGAAATGGAAGAATTATTTCCATATGCATTAGAGGCTATTGACAATACTGTGAAAATAGCTGATATGTGTAATGTGGAGTTTGATTTTAATACTATACATCTTCCTAAGTATGATGTTCCAGAAGGATATACACCAGAAACTTATTTAAGGGAGTTGTGTTTTAATGGATTAAAAGAGAGATATGATAATCCTAGCAATGAGATACTAGAGAGATTAAATTATGAATTAGATGTAATTGAAAAAATGGGTTATGTAGAGTATTTTTTAATTGTTTGGGATTTTATAAATTTTTCTAAAGAAAATAATATTATAGTAGGACCAGGTAGAGGTAGTGCGGCTGGTTCGATAGTAGCATATACACTTAAGATAACTGATATAGACCCAATAAAGTACTCTCTATTATTTGAGCGTTTTTTAAATCCAGAACGTATATCCATGCCAGATATAGATATAGATTTTTGTTATGAGAGAAGAGAAGAAGTTATAGATTATGTAAAGAGAAAATATGGTGATGACCATGTAGCCCAGATAATAACTTTTGGAACAATGGGTGCAAAAGCTGCAATAAGAGATGTTGGAAGGGTATTGGATATAGGCTACAATAAAGTTGACAAGGTAGCCAAGGAAATACCATTTGCTTTAGGAATGACAATAGATAAGGCCCTAGATACGAATCCTAATCTTAAAGAATTGTATGACCAAGACCCGGAAACAAAAGAAATAATAAATATATCAAAACAGATAGAGGGAATGCTAAGACATGCTTCTACTCATGCAGCAGGAGTTGTTATATCAAAAAATCCCGTAGATGAATATGTACCTTTGTACAAACATCAAGATGCAATCACAACACAGTTTACTATGACAACACTTGAAGAACTTGGGCTTTTAAAGATGGATTTTCTTGGGCTAAGAACTCTTACAGTTATAAGAGATACTCTTGATTTAATAGAAAAAAATAGAGTTATAAAAAACTACACAGAAAAAATAGACTTTTCAAAGATGGATTATGACGACCCGAAAGTATATGAAATGCTTTCATCAGGAAATACACTAGGGGTGTTTCAATTGGAGAGTGCTGGCATGAGAAGTTTTATGAAACAGCTAAAACCAGACAATTTTGAAGATATTGTAGCGGGAATATCCCTATTTAGACCAGGTCCAATGGATTCTATACCTGCATATATAAAAAATAAAAGCAACCCAAAAGATGTAACATATCTACATGAAAAATTAAAGCCTATAATGGAAGTTACATATGGTTGTTTGGTATATCAAGAGCAGGTTATGCAGGTCGTTAGAGATTTAGGTGGTTATAGTTACGGACGAAGTGACCTAGTTAGAAGAGCCATGAGTAAGAAAAAGATGGATGTGATGGAAGAAGAAAGACAATATTTTATTCATGGTAAATTTGATGAAGATGGTAATATAGAAATTGCAGGGTGTATCAGAAATGGTGTAGAAGAGGAAATAGCTAATAAAATATTTGATGATATGATAGACTTCGCTAGATATGCATTTAATAAATCACATGCAGCTGCATATGGGGTTTTAGCATATGAGACAGCTTATCTAAAAACATATTATCCAGTTGAATTTATGGCAGCATTGATAACCAGTGTAATGGGAAATACTGATAAGGTAGTTGAGTATATAAGAGAATGTAAAGCACTAGAAATAGATGTATTACCTCCAGATATAAACAAAAGTTTTTCAAAGTTTTCAGTTGAAGGCGACAATATAAGATTTGGTCTAGCAGCTGTAAAAAATGTTGGTGTAAATATAATAAACAATATAATCGCTGAAAGAGAATCTAATGGATTATTTGTAGATTTAGTAGATTTAGTCAAAAGATTAGACCAAAAAGATACAAATAAGAGAGTAATAGAAAGTCTAATAAAATGTGGAGCTTTTGATAATATAAGTGAAAATAGAGCTAGTCTGATGGCTGGTTATGAAAGTTTATTAGAAAGTGTATCTATGGATAGAAAGAAAAATGTTCAAGGTCAAATTTCTTTATTTGATGCTTTTGGAGATAGTGAGGAAGATAGTGATTTTCAACAAATATACAGTTTACCTAAAAGGCAAGAGTATGAAGAAAGAGAGAGACTTAACCTTGAAAAAGAAGTCTTGGGAATGTATGTAAGTGGACATCCTTTATCACAATTTGAAAAAGAACTACAAGAAAAAACATCTATGGATAATGGAAAATTAAATTCATTAAAAGAGGAAGAAGAGTCATACCTACAAATGAATGAAACAGATGTTATAATGGGTGGAATGATTGTAACTAAAACCATTAAAACAACAAAACGAAATGAAATTATGGCATTTATTGAATTAGAAGATTTGTATGGTGCTATAGAAATAATAGTTTTTCCTCAATTATTACAAAAGTATAATGTCATTTTGAATGAAGATAATATAATATATGTAAAAGGAACATTAAGTATAAAAGAAGGCGAAAATGCAAAACTTATAGCTAGAGAGATAAAAGATATAAATGATGATACTGACTTTGCAGATAGAAACTACAATTCAGGAAGAACTAGAAATGTAGAAAATATTAAGCCAGAAAGTGGTAAAAAATTGTATTTGAAAATAGATAGTATGTCTGATACTGATACAACTAATAATATTGTAGAAATAGCCAAACAATATCCAGGTAATGACAGTATATACTTGTACCCTATGGATGAAAATATAAATGGTAAACGTAAAGCATATAAAATGACCGGGGCATTGACTTGTATATGTGATGAATTTATAAATAACTTAGAAGAGTTACTTCCTAAAGATAACATAAAAGTAAAAGCTTGA
PROTEIN sequence
Length: 1190
MNKDFAHLHVHTEYSLLDGFSRVKKLIKRAKELNMSSIAITDHGCMFGVIDFYKTAIKEGIKPIIGCEVYTAARGLRDKDPNYDKYQGHLVLLAKNMEGYKNLIKIVSTSYVEGFYYKPRVDMEELKKHNKGIIALSACLAGDVARALMNRNYEKAKQFALDYRDIFGEENFFLEIQDHNLPEQKEVNSGLVKLSKETGIPLVATNDVHYVNKEDSKIHDVLMCIQMGKTLNDPNRMRFGSDEFYLKSREEMEELFPYALEAIDNTVKIADMCNVEFDFNTIHLPKYDVPEGYTPETYLRELCFNGLKERYDNPSNEILERLNYELDVIEKMGYVEYFLIVWDFINFSKENNIIVGPGRGSAAGSIVAYTLKITDIDPIKYSLLFERFLNPERISMPDIDIDFCYERREEVIDYVKRKYGDDHVAQIITFGTMGAKAAIRDVGRVLDIGYNKVDKVAKEIPFALGMTIDKALDTNPNLKELYDQDPETKEIINISKQIEGMLRHASTHAAGVVISKNPVDEYVPLYKHQDAITTQFTMTTLEELGLLKMDFLGLRTLTVIRDTLDLIEKNRVIKNYTEKIDFSKMDYDDPKVYEMLSSGNTLGVFQLESAGMRSFMKQLKPDNFEDIVAGISLFRPGPMDSIPAYIKNKSNPKDVTYLHEKLKPIMEVTYGCLVYQEQVMQVVRDLGGYSYGRSDLVRRAMSKKKMDVMEEERQYFIHGKFDEDGNIEIAGCIRNGVEEEIANKIFDDMIDFARYAFNKSHAAAYGVLAYETAYLKTYYPVEFMAALITSVMGNTDKVVEYIRECKALEIDVLPPDINKSFSKFSVEGDNIRFGLAAVKNVGVNIINNIIAERESNGLFVDLVDLVKRLDQKDTNKRVIESLIKCGAFDNISENRASLMAGYESLLESVSMDRKKNVQGQISLFDAFGDSEEDSDFQQIYSLPKRQEYEERERLNLEKEVLGMYVSGHPLSQFEKELQEKTSMDNGKLNSLKEEEESYLQMNETDVIMGGMIVTKTIKTTKRNEIMAFIELEDLYGAIEIIVFPQLLQKYNVILNEDNIIYVKGTLSIKEGENAKLIAREIKDINDDTDFADRNYNSGRTRNVENIKPESGKKLYLKIDSMSDTDTTNNIVEIAKQYPGNDSIYLYPMDENINGKRKAYKMTGALTCICDEFINNLEELLPKDNIKVKA*