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NECEvent2014_2_3_scaffold_57_20

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(22506..23588)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system, permease n=113 Tax=Clostridium difficile RepID=Q188H2_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 360.0
  • Bit_score: 697
  • Evalue 7.90e-198
  • rbh
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 360.0
  • Bit_score: 697
  • Evalue 2.20e-198
ABC-type transport system, permease {ECO:0000313|EMBL:CAJ68988.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 360.0
  • Bit_score: 697
  • Evalue 1.10e-197

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGAAAATTATCCAAAAGAGAAAAAGATTTTATTCAATATGGATTTTTATTATTTTTGATATGTATTACTACTTATTTAGTATTAACTACTTTAGATATAAAACTAATACCTAAAATTATAAGGCTAGTAAATAAGACTTATATATTTCTTGGCATATTGACAATTATAGTATATATGATAATTGAATCTATTGTAACTCATTTGATAATAAATGCAGTTCAAAAAACAAAAGTGAAATTTATTGGTATTAAAATGGCTACAATGGGATTTTACTATAACTTAGTTACTCCATTTGCATCTGGGAGTCAACCAATGCAAATATATGCACTTACAAAATATGATGTAAGCCTTAGTAAATCAGTGGCTATAGTTACTAATAAAACTGTAGTATTTCAAAGTACAGTTACCGTATTTTGTGGAATTTTAATTTTGCTAAATAAGTCATTACTGATGGAGCAAGTACATTCTGTGAAAGTCTTGATAACTTTTGGAATGATTATGAATGTAAGTATGTTGTTAGGTGGACTACTAATAGTATTTAGTCCAAAACAAGTAAAAATGATAGCAGAAGTTTTGATTAATTTTTTATCTAAATTTAAAACATTTAAATTTTTAGATTCAAAACGTGATAGAATAAATCATTATATTGATGATTATAATTATTCTATAAAAATATTTATTAAAAATGTAAGAATCTTAGTTTTAAGTATATTACTTACTGTGTTACAATTAATCGCATATTTCAGTATAGTTTATTGTGTGTATAAAGCCTCAAATTTAAGAGGAGTTTCATATGTACATATAATGACATTACAGGTCTTTTTATATATGGCTATATCACCAATTCCAACACCAGGAAATGTTGGAGCTAATGAGGTTACATTTTTTACTATGTTCTCCAATATAATTCCAAAAGAATTATTGGGGTACTCTGTACTCTTATATAGTGGGTTTGTATACTATTTTATATTAATAGTTTCAGGTTTATTTACATTTGGAACGCATTATACATTAAATTCTTGGAAAAAGGAAGATAAAGTAAATTCTAATTTAGATAAGGTTATTGAAAAATTAAATTAA
PROTEIN sequence
Length: 361
MRKLSKREKDFIQYGFLLFLICITTYLVLTTLDIKLIPKIIRLVNKTYIFLGILTIIVYMIIESIVTHLIINAVQKTKVKFIGIKMATMGFYYNLVTPFASGSQPMQIYALTKYDVSLSKSVAIVTNKTVVFQSTVTVFCGILILLNKSLLMEQVHSVKVLITFGMIMNVSMLLGGLLIVFSPKQVKMIAEVLINFLSKFKTFKFLDSKRDRINHYIDDYNYSIKIFIKNVRILVLSILLTVLQLIAYFSIVYCVYKASNLRGVSYVHIMTLQVFLYMAISPIPTPGNVGANEVTFFTMFSNIIPKELLGYSVLLYSGFVYYFILIVSGLFTFGTHYTLNSWKKEDKVNSNLDKVIEKLN*