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NECEvent2014_2_3_scaffold_72_18

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(19325..19876)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=24 Tax=Clostridium difficile RepID=T2TRA5_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 361
  • Evalue 4.00e-97
  • rbh
putative RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 361
  • Evalue 1.10e-97
Ribosomal subunit interface protein {ECO:0000313|EMBL:EHJ34747.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 361
  • Evalue 5.60e-97

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 552
ATGAACATAATTATATCTGGAAAACAAATCGAATTAACTGATGCAATAAAAAATAAAATCGAAACTAAACTAAGTAAGTTAGATAATTACATTCATCCAGACACTGATGTAAAAGTTACAGTAAGTGCGAGAAAAGCAAGACAAAAAATAGAAGTAACAATAGCTACTGTAAATGGTCCTATAATTAGAGCAGAAGATATGCAGGAAAATTTATACACAGCTATAGATGTTGTATATGATAAATTAAGTAAACAATTAAAAAAATATAAAAAGAGATTACAAGATAAACATAAAGACAACAAGAGTATAAGATTCCAAGATGCAGAGATAAATCTAGCTGATGAACAAGAGGATTATGGGGATGAAAATCAAGAATTAGTAATTCAAAGACGTAAGAAATTTAGTGTTAAGCCAATGAGTGAAGAAGAAGCTGTATTACAGATGGAATTAATAGGACATGATTTTTATATGTTCAAGAACATAGATTCAGATGAAATAGCAGTAGTTTATAAGCGTAATAATGGTGGATATGGTATAATAGAACATGAATAA
PROTEIN sequence
Length: 184
MNIIISGKQIELTDAIKNKIETKLSKLDNYIHPDTDVKVTVSARKARQKIEVTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKSIRFQDAEINLADEQEDYGDENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVYKRNNGGYGIIEHE*