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NECEvent2014_2_3_scaffold_77_13

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 11745..13550

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 601.0
  • Bit_score: 1180
  • Evalue 0.0
Elongation factor 4 n=120 Tax=Clostridium difficile RepID=LEPA_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 601.0
  • Bit_score: 1182
  • Evalue 0.0
  • rbh
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 601.0
  • Bit_score: 1180
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1806
GTGGACAATAAACAAAGTAGAACTAGAAATTTTAGTATAATTGCACATATAGACCATGGAAAGTCTACCTTAGCTGATAGATTAATACAACAAACTGGGCTTGTTAGTGAAAGAGACATGAAAAGTCAATTACTTGACAATATGGACCTTGAAAGAGAAAGAGGAATCACTATAAAGCTTCAAAACATAAGATTAATGTATAAAGCGAAGGATGGAAATGAATATTATTTAAATCTTATAGATACACCTGGACATGTAGACTTTAACTATGAGGTATCAAGAAGTTTAGCTGCATGTGAAGGAGCACTATTAGTAGTTGATGCAGCTCAAGGTGTTGAGGCACAAACTTTAGCCAATGTTTATCTTGCTATAGACCAAGATTTAGAAATATTACCAATAATAAATAAAATAGATTTACCAAGTGCAAGACCAGAGGAAGTAAAAAATGAAATAGAAGATTTAATAGGGCTTGATTCAAGTGAAGCTCCTCTTATTTCAGCTAAAACTGGTTTAAACATAGAAGATGTTTTAGAAGATATTGTAAAAAATGTTCCTCCACCTAAAGGAGATAATGAAGCTCCATTAAAGGCATTAATATTCGATTCTTACTATGATGCTTACAAAGGTGTTGTAGCTTATGTTAGAGTATTTGAAGGAACTGTTAAAAAGGGTATGACAATAAAAATGATGAATACCAATAAAAAGTTTGAGGTAACTGAAGTTGGTGTCATGGCTCCAGGTCAAACTGAACTTAGTGAATTATCAGCAGGTGATGTTGGTTATATTGCTGCTAGTATAAAAGATATAAGAAGTTGTCGTGTTGGTGATACAATAACAGATTCAAATAATCCTACAGAAGAACCTTTACCAGGATACAAAAAAGCTACTCCAATGGTATATTGTGGTATATATCCAGGAGAAGGAGAAAAGTATGAGAATGTTAGAGATGCTCTTGAAAAGCTTCAAGTAAATGATGCTGCACTTGAATATGAAGCTGAGACTTCAGCAGCACTAGGATTTGGTTTTAGATGTGGTTTCTTAGGTCTTTTACATATGGAGATAATGCAAGAAAGACTTGAGAGAGAATTTAACCTTGATATAATTACTACAGCTCCATCTGTTATATATAGAGTTACAAAAATGGATGGAGAGGTTGTAATGATACAAAATCCTGCAAACTTACCAGAACCATCTGAGATAAAGATGATAGAAGAGCCTATAGTAAAAGGAGATATAATAGTTCCTAAAGACTATGTGGGTGTTGTTATGGAGCTTTGCCAGGAAAGACGTGGAAATATGTTAAATATGGAATATATAGATGAGAGAAGAGTAATGCTTCACTATGACCTTCCTCTCAATGAAGTTGTTTACGATTTCTTTGATGCTTTAAAATCAAGAACTAGAGGTTATGGTTCTCTTGATTATGAGGTTAAAGGTTATGTAGCATCTACACTTGTAAAACTTGATATATTAATCAATAAAGAGCAAGTGGATGCACTTAGTTTTATTGTCCATGAGACACGTGCTTTCCCTAGAGGAAAGGCAATGTGTGAGAAATTAAAAGGAGAAATTCCAAGACATCAGTTTGCTATACCAATACAAGCTGCTGTTGGTAATAAGGTTATTGCAAGAGAAACAATAAGCGCTCTAAGAAAAGATGTTCTTGCTAAATGTTATGGTGGAGATATATCTCGTAAGAAGAAACTTCTTGAAAAACAAAAAGAAGGTAAGAAGCGTATGAGACAAATTGGTTCTGTTGAAGTTCCTCAAAAAGCATTTATGTCTGTGCTTAAATTAGATGAGTAA
PROTEIN sequence
Length: 602
VDNKQSRTRNFSIIAHIDHGKSTLADRLIQQTGLVSERDMKSQLLDNMDLERERGITIKLQNIRLMYKAKDGNEYYLNLIDTPGHVDFNYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLAIDQDLEILPIINKIDLPSARPEEVKNEIEDLIGLDSSEAPLISAKTGLNIEDVLEDIVKNVPPPKGDNEAPLKALIFDSYYDAYKGVVAYVRVFEGTVKKGMTIKMMNTNKKFEVTEVGVMAPGQTELSELSAGDVGYIAASIKDIRSCRVGDTITDSNNPTEEPLPGYKKATPMVYCGIYPGEGEKYENVRDALEKLQVNDAALEYEAETSAALGFGFRCGFLGLLHMEIMQERLEREFNLDIITTAPSVIYRVTKMDGEVVMIQNPANLPEPSEIKMIEEPIVKGDIIVPKDYVGVVMELCQERRGNMLNMEYIDERRVMLHYDLPLNEVVYDFFDALKSRTRGYGSLDYEVKGYVASTLVKLDILINKEQVDALSFIVHETRAFPRGKAMCEKLKGEIPRHQFAIPIQAAVGNKVIARETISALRKDVLAKCYGGDISRKKKLLEKQKEGKKRMRQIGSVEVPQKAFMSVLKLDE*