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NECEvent2014_2_3_scaffold_77

Alias: 172_003_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_77_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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81..788
DNA (708bp) protein (236aa)
ThiF family protein n=158 Tax=Clostridium difficile RepID=T3GGH4_CLODC rbh
intron RNA domain IV
Putative molybdenum cofactor biosynthesis {ECO:0000313|EMBL:CAJ69366.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto
NECEvent2014_2_3_scaffold_77_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(930..1766)
DNA (837bp) protein (279aa)
Metallo-beta-lactamase superfamily protein n=119 Tax=Clostridium difficile RepID=T2TBL5_CLODI rbh
DNA uptake transporter
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EQH98685.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
NECEvent2014_2_3_scaffold_77_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1954..2859
DNA (906bp) protein (302aa)
Uncharacterized protein n=185 Tax=Clostridium difficile RepID=C9XMK3_CLODC rbh
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CEJ99099.1}; Uncharacterized conserved protein {ECO:0000313|EMBL:CKH33755.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS88102.1}; TaxID=1496 species="Bacte
NECEvent2014_2_3_scaffold_77_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2868..4052
DNA (1185bp) protein (395aa)
Uncharacterized protein n=42 Tax=Clostridium difficile RepID=Q182G3_CLOD6 rbh
gnat family acetyltransferase
Gnat family acetyltransferase {ECO:0000313|EMBL:CEJ99098.1}; N-acetyltransferase GCN5 {ECO:0000313|EMBL:CKH33729.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoco
NECEvent2014_2_3_scaffold_77_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4215..5468
DNA (1254bp) protein (418aa)
ComEC/Rec2-related domain protein n=5 Tax=Clostridium difficile RepID=T2TXC0_CLODI rbh
putative membrane protein
Competence membrane protein {ECO:0000313|EMBL:CKH33696.1}; Putative membrane protein {ECO:0000313|EMBL:CEJ99097.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococ
NECEvent2014_2_3_scaffold_77_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5422..6465
DNA (1044bp) protein (348aa)
DNA polymerase III, delta subunit n=5 Tax=Clostridium difficile RepID=T3GEY5_CLODC rbh
DNA polymerase III%2C delta subunit {ECO:0000313|EMBL:CKH33670.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
DNA polymerase III, delta subunit
NECEvent2014_2_3_scaffold_77_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6652..6948)
DNA (297bp) protein (99aa)
30S ribosomal protein S20 n=5 Tax=Clostridium difficile RepID=D5Q2H3_CLODI
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
rpsT; 30S ribosomal protein S20
NECEvent2014_2_3_scaffold_77_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7517..8038
DNA (522bp) protein (174aa)
Bacterial regulatory , arsR family protein n=120 Tax=Clostridium difficile RepID=T3GIX8_CLODC rbh
Transcriptional regulator, ArsR family
Transcriptional regulator {ECO:0000313|EMBL:CKH33625.1}; Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CEJ99094.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
NECEvent2014_2_3_scaffold_77_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8072..8848
DNA (777bp) protein (259aa)
Alpha/beta hydrolase family protein n=24 Tax=Clostridium difficile RepID=T3GID3_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69358.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_77_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9191..10144
DNA (954bp) protein (318aa)
gpr; Spore endopeptidase (EC:3.4.24.78)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-
Germination protease n=178 Tax=Clostridium difficile RepID=T3GGP4_CLODC rbh
NECEvent2014_2_3_scaffold_77_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10162..11181
DNA (1020bp) protein (340aa)
Stage II sporulation P family protein n=75 Tax=Clostridium difficile RepID=T3GIZ4_CLODC rbh
spoIIP; Stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:CEJ99091.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_3_scaffold_77_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11212..11463
DNA (252bp) protein (84aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T3GIE6_CLODC
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH33444.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ99090.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_77_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11745..13550
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=120 Tax=Clostridium difficile RepID=LEPA_CLOD6 rbh
GTP-binding protein LepA
NECEvent2014_2_3_scaffold_77_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13699..15036
DNA (1338bp) protein (446aa)
Poly A polymerase head domain protein n=28 Tax=Clostridium difficile RepID=T3GIF0_CLODC rbh
putative tRNA-nucleotidyltransferase/Poly(A)polymerase family member
Putative tRNA-nucleotidyltransferase/Poly(A) polymerase family member {ECO:0000313|EMBL:CAJ69353.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto
NECEvent2014_2_3_scaffold_77_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15269..16582
DNA (1314bp) protein (438aa)
Amino acid permease family protein n=166 Tax=Clostridium difficile RepID=T3GE55_CLODC rbh
amino acid/polyamine transporter
Amino acid permease family protein {ECO:0000313|EMBL:EQH98671.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_77_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16754..17929
DNA (1176bp) protein (392aa)
hemN; Oxygen-independent coproporphyrinogen-IIIoxidase (Coproporphyrinogenase) (Coprogen oxidase) (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CKH33311.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CKH33311.1};; Oxygen-independent coproporphyrinogen-IIIoxidase (Coproporphyrinogenase) (
Radical SAM superfamily protein n=152 Tax=Clostridium difficile RepID=T3GF32_CLODC rbh
NECEvent2014_2_3_scaffold_77_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18032..19051
DNA (1020bp) protein (340aa)
Heat-inducible transcription repressor hrcA n=2 Tax=Clostridium difficile RepID=C9XLP7_CLODC rbh
heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcac
NECEvent2014_2_3_scaffold_77_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19081..19701
DNA (621bp) protein (207aa)
Protein GrpE n=189 Tax=Clostridium difficile RepID=GRPE_CLOD6 rbh
heat shock protein
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
NECEvent2014_2_3_scaffold_77_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19793..21640
DNA (1848bp) protein (616aa)
Chaperone protein DnaK n=157 Tax=Clostridium difficile RepID=DNAK_CLOD6 rbh
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
NECEvent2014_2_3_scaffold_77_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21851..23005
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ n=176 Tax=Clostridium difficile RepID=DNAJ_CLOD6 rbh
dnaJ; chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium
NECEvent2014_2_3_scaffold_77_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23971..24906
DNA (936bp) protein (312aa)
ROK family glucokinase (EC:2.7.1.-)
Putative glucokinase, ROK family {ECO:0000313|EMBL:CCK94937.1}; EC=2.7.1.- {ECO:0000313|EMBL:CCK94937.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
ROK family protein n=123 Tax=Clostridium difficile RepID=T3ILM6_CLODC rbh
NECEvent2014_2_3_scaffold_77_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24942..26315
DNA (1374bp) protein (458aa)
Sugar (And other) transporter family protein n=26 Tax=Clostridium difficile RepID=T3IMX5_CLODC rbh
Transporter, Major Facilitator Superfamily(MFS)
Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CAJ69345.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_77_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26503..27270)
DNA (768bp) protein (256aa)
Uncharacterized protein n=24 Tax=Clostridium difficile RepID=Q182E5_CLOD6 rbh
conserved hypothetical protein
Transcriptional regulator CdaR {ECO:0000313|EMBL:CKH33040.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ99078.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoco
NECEvent2014_2_3_scaffold_77_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27300..28409)
DNA (1110bp) protein (370aa)
ABC-type transport system, sugar-familyATP-binding protein (EC:3.6.3.-)
ABC-type transport system, sugar-family ATP-binding protein {ECO:0000313|EMBL:CAJ69343.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ69343.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridia
ABC transporter family protein n=26 Tax=Clostridium difficile RepID=T3GGR4_CLODC rbh
NECEvent2014_2_3_scaffold_77_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28868..29005
DNA (138bp) protein (46aa)
hypothetical protein n=1 Tax=Clostridium difficile RepID=UPI0001B46353
Uncharacterised protein {ECO:0000313|EMBL:CKH32987.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_77_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29037..29774
DNA (738bp) protein (246aa)
CRISPR-associated endoribonuclease Cas6 n=74 Tax=Clostridium difficile RepID=T3GIH6_CLODC rbh
putative CRISPR-associated protein
CRISPR-associated endoribonuclease Cas6 {ECO:0000313|EMBL:CKH32957.1}; Putative CRISPR-associated protein {ECO:0000313|EMBL:CEJ99076.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridi
NECEvent2014_2_3_scaffold_77_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29779..31254
DNA (1476bp) protein (492aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T3GE73_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69341.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_77_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31274..32290
DNA (1017bp) protein (339aa)
CRISPR-associated autoregulator DevR family protein n=74 Tax=Clostridium difficile RepID=T3GF48_CLODC rbh
putative CRISPR-associated negativeautoregulator
Putative CRISPR-associated negative autoregulator {ECO:0000313|EMBL:CCL22789.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_77_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32306..33103
DNA (798bp) protein (266aa)
CRISPR-associated Cas5 domain protein n=74 Tax=Clostridium difficile RepID=T3GGS3_CLODC rbh
putative CRISPR-associated protein
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:CKH32900.1}; Putative CRISPR-associated protein {ECO:0000313|EMBL:CEJ99073.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
NECEvent2014_2_3_scaffold_77_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33130..35538
DNA (2409bp) protein (803aa)
CRISPR-associated endonuclease Cas3-HD n=74 Tax=Clostridium difficile RepID=T2TX98_CLODI rbh
putative CRISPR-associated ATP-dependenthelicase
Putative CRISPR-associated ATP-dependent helicase {ECO:0000313|EMBL:CAJ69338.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
Displaying items 1-30 of 52 in total

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