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NECEvent2014_2_3_scaffold_81_5

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(3168..3386)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=U4ATK1_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 137
  • Evalue 4.90e-30
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK68528.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 69.0
  • Bit_score: 62
  • Evalue 2.80e-07
Helix-turn-helix. similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 69.0
  • Bit_score: 61
  • Evalue 1.60e-07

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Taxonomy

Oscillibacter sp. KLE 1745 → Oscillibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 219
GTGCGTATCTATGCTTTATCTGAAACACCCAGACAACGAGATTCAGATTCATATAATAGCTACCATGTTTCTAAAAAGGAACTTGCAAAAAAAATAGGCGTTTCAACTTCCCAGTTGATTAAAATTATCAGCAGGAAAACAAGTATAGTCAGCAGTGGTATTCTAATGGGTGTTGTCGATATATCCAAGTTGGGATTGTCTGAGGATGTTATCAAATAA
PROTEIN sequence
Length: 73
VRIYALSETPRQRDSDSYNSYHVSKKELAKKIGVSTSQLIKIISRKTSIVSSGILMGVVDISKLGLSEDVIK*