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NECEvent2014_2_3_scaffold_81

Alias: 172_003_scaffold_81

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_81_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..573)
DNA (573bp) protein (191aa)
Cell wall binding repeat 2 family protein n=18 Tax=Clostridium difficile RepID=T3BU52_CLODI
Cell surface protein {ECO:0000313|EMBL:CCL22855.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
cell surface protein
NECEvent2014_2_3_scaffold_81_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1317..1706
DNA (390bp) protein (130aa)
Phage integrase family protein n=23 Tax=Clostridium difficile RepID=T3GG80_CLODC
Integrase
Integrase {ECO:0000313|EMBL:CEJ99141.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium
NECEvent2014_2_3_scaffold_81_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2214..2882)
DNA (669bp) protein (223aa)
VanZ like family protein n=59 Tax=Clostridium difficile RepID=T3GDN4_CLODC rbh
Putative conjugative transposon antibiotic resistance protein {ECO:0000313|EMBL:CCL22858.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
hypothetical protein
NECEvent2014_2_3_scaffold_81_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2981..3148)
DNA (168bp) protein (56aa)
Uncharacterized protein n=49 Tax=Clostridium difficile RepID=T2UPC6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE60793.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_81_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3168..3386)
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=U4ATK1_CLODI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK68528.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp.
Helix-turn-helix.
NECEvent2014_2_3_scaffold_81_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3737..6157)
DNA (2421bp) protein (807aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1215059 species="Bacteria; Firmic
Leucine--tRNA ligase n=146 Tax=Clostridium difficile RepID=SYL_CLOD6 rbh
leuS; leucyl-tRNA synthetase
NECEvent2014_2_3_scaffold_81_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6511..6861)
DNA (351bp) protein (117aa)
Ribosomal silencing factor RsfS n=214 Tax=Clostridium difficile RepID=C9XMP4_CLODC
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_81_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6978..7550)
DNA (573bp) protein (191aa)
Uncharacterized protein n=202 Tax=Clostridium difficile RepID=T3GG84_CLODC rbh
hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EQE60789.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_81_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7551..8240)
DNA (690bp) protein (230aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=216 Tax=Clostridium difficile RepID=C9XMP6_CLODC rbh
nicotinate-nucleotide adenylyltransferase
NECEvent2014_2_3_scaffold_81_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8516..9154
DNA (639bp) protein (213aa)
Regulatory protein RecX n=181 Tax=Clostridium difficile RepID=RECX_CLOD6 rbh
recX; Regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridiu
NECEvent2014_2_3_scaffold_81_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9307..11310
DNA (2004bp) protein (668aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococ
Alpha amylase, catalytic domain protein n=5 Tax=Clostridium difficile RepID=T3GG57_CLODC rbh
gbeA; glycogen branching enzyme
NECEvent2014_2_3_scaffold_81_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11484..12125
DNA (642bp) protein (214aa)
Bacterial regulatory s, tetR family protein n=42 Tax=Clostridium difficile RepID=T3GEI0_CLODC rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH07883.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
Transcriptional regulator, TetR family
NECEvent2014_2_3_scaffold_81_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12236..12901
DNA (666bp) protein (222aa)
Uncharacterized protein n=118 Tax=Clostridium difficile RepID=T3GDK7_CLODC rbh
Uncharacterized protein {ECO:0000313|EMBL:EQI80526.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
conserved hypothetical protein
NECEvent2014_2_3_scaffold_81_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13078..13389)
DNA (312bp) protein (104aa)
Antibiotic biosynthesis monooxygenase family protein n=5 Tax=Clostridium difficile RepID=T3GHZ9_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ24631.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_81_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13467..14285)
DNA (819bp) protein (273aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=63 Tax=Clostridium difficile RepID=T2THS1_CLODI rbh
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQH98493.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
Transcriptional regulator, AraC family
NECEvent2014_2_3_scaffold_81_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14385..14909)
DNA (525bp) protein (175aa)
ECF-type riboflavin transporter, S component family protein n=30 Tax=Clostridium difficile RepID=T3GEH2_CLODC rbh
membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ69418.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_81_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14928..16070)
DNA (1143bp) protein (381aa)
alanine--glyoxylate transaminase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:CKH35714.1}; EC=1.12.-.- {ECO:0000313|EMBL:CKH35714.1};; Aminotransferase, alanine--glyoxylatetransaminase {ECO:0000313|EMBL:CEJ99155.1}; EC=2.6.1.- {ECO:0000313|EMB
Aminotransferase class-V family protein n=54 Tax=Clostridium difficile RepID=T3GDJ9_CLODC rbh
NECEvent2014_2_3_scaffold_81_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16350..18737)
DNA (2388bp) protein (796aa)
FtsX-like permease family protein n=13 Tax=Clostridium difficile RepID=T3GHZ1_CLODC rbh
ABC-type transport system, permease
ABC transporter permease {ECO:0000313|EMBL:CKH35750.1}; ABC-type transport system, permease {ECO:0000313|EMBL:CEJ99156.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
NECEvent2014_2_3_scaffold_81_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18730..19413)
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=5 Tax=Clostridium difficile RepID=T3GII4_CLODC rbh
ABC transporter family protein {ECO:0000313|EMBL:EQH98497.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_81_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19530..20840)
DNA (1311bp) protein (437aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
His Kinase A domain protein n=9 Tax=Clostridium difficile RepID=T3GG53_CLODC rbh
two-component sensor histidine kinase
NECEvent2014_2_3_scaffold_81_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20834..21541)
DNA (708bp) protein (236aa)
Two-component response regulator n=193 Tax=Clostridium difficile RepID=C9XMQ6_CLODC rbh
two-component response regulator
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQH98499.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_81_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21846..23687)
DNA (1842bp) protein (614aa)
putative membrane-associated5'-nucleotidase/phosphoesterase (EC:3.1.3.5)
Calcineurin-like phosphoesterase family protein n=3 Tax=Clostridium difficile RepID=T2TWH8_CLODI rbh
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EQH98500.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_81_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23900..24784)
DNA (885bp) protein (295aa)
Uncharacterized protein n=29 Tax=Clostridium difficile RepID=T3GEG6_CLODC rbh
Uncharacterized protein {ECO:0000313|EMBL:EQH98501.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
putative lipoprotein
NECEvent2014_2_3_scaffold_81_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24992..25909
DNA (918bp) protein (306aa)
rnz; Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3endonuclease) (EC:3.1.26.11)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=196 Tax=Clostridium difficile RepID=RNZ_CLOD6 rbh
NECEvent2014_2_3_scaffold_81_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26051..27385)
DNA (1335bp) protein (445aa)
Coenzyme A disulfide reductase (EC:1.8.1.14)
Pyridine nucleotide-disulfide oxidoreductase family protein n=109 Tax=Clostridium difficile RepID=T3GHY3_CLODC rbh
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:EQE60806.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi
NECEvent2014_2_3_scaffold_81_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27726..29114
DNA (1389bp) protein (463aa)
Dicarboxylate family transmembrane symporter n=20 Tax=Clostridium difficile RepID=T2TX66_CLODI rbh
Dicarboxylate family transmembrane symporter {ECO:0000313|EMBL:EQE60790.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
Sodium:glutamate/aspartate symporter family
NECEvent2014_2_3_scaffold_81_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29188..30396)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=132 Tax=Clostridium difficile RepID=T3GEF3_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69429.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_81_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30411..31829)
DNA (1419bp) protein (473aa)
membrane-bound O-acyl transferase (EC:2.3.1.-)
Putative membrane-bound 0-ACYL transferase,MBOAT family {ECO:0000313|EMBL:CAJ69430.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAJ69430.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
MBOAT, membrane-bound O-acyltransferase family protein n=87 Tax=Clostridium difficile RepID=T4ALQ2_CLODI rbh
NECEvent2014_2_3_scaffold_81_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31847..32923)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=25 Tax=Clostridium difficile RepID=U4AX36_CLODI rbh
Putative membrane protein {ECO:0000313|EMBL:EQI80542.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
hypothetical protein
NECEvent2014_2_3_scaffold_81_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32934..35240)
DNA (2307bp) protein (769aa)
bcsA; Cellulose synthase catalytic subunit(UDP-forming) (EC:2.4.1.12)
Glycosyl transferase 2 family protein n=6 Tax=Clostridium difficile RepID=T3GIG1_CLODC rbh
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQI80543.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
Displaying items 1-30 of 46 in total

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