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NECEvent2014_2_3_scaffold_81_12

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 11484..12125

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, tetR family protein n=42 Tax=Clostridium difficile RepID=T3GEI0_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 437
  • Evalue 6.70e-120
  • rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH07883.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 213.0
  • Bit_score: 436
  • Evalue 1.60e-119
Transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 213.0
  • Bit_score: 433
  • Evalue 3.50e-119

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 642
TTGGGAAGAAAAAAAGAACCTGATAATACTATACAAAAAATACTTGATATTTCACATAAGTTATTCTTAGAAAAAGGGTATGAGCAGACAACGATTCAAGATATTGTAGATAATTTAGATGGCCTTTCAAGAGGTGCTATTTATCATCACTTTAAATCAAAAGACGAAATAATTAAGGCAATCACAAGTCGTTTGTATAATGATGGATTTTATGGATATGATGTAAAAAATGATGAAGGAAAGACCGCATTAGAAAAATTACAATATAGGTTGCTTCATGCTTATGAACAACACAATAAACAAGACATTTTTTTAATGTCATCATCACTATTGCGTAATCCTAAGTATTTAGCTACGCAGTTTGATGAGATTATAAATGATATTGTGCCTTGGATAAAAGCATTGATTGAAGAAGGAAATCAAGATAATTCTATGCAAGTTAAAAATCCAGAGATTGCTGCTCAAATGTTTGGTTTTCTTCTAAACACATGGTGTATTCCAACAGTTTATCCAGGTAATCCACAACAGATGATAGAACGTTTTACTTTGTTTGGTGAGCAAGCTGCTTTTATGGGTATTTCTTTTATGAATGATAAGATAATGTGTGAATATCAAAAATTTGTTAATAAATTTTCTAAATAG
PROTEIN sequence
Length: 214
LGRKKEPDNTIQKILDISHKLFLEKGYEQTTIQDIVDNLDGLSRGAIYHHFKSKDEIIKAITSRLYNDGFYGYDVKNDEGKTALEKLQYRLLHAYEQHNKQDIFLMSSSLLRNPKYLATQFDEIINDIVPWIKALIEEGNQDNSMQVKNPEIAAQMFGFLLNTWCIPTVYPGNPQQMIERFTLFGEQAAFMGISFMNDKIMCEYQKFVNKFSK*