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NECEvent2014_2_3_scaffold_81_33

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(38334..39143)

Top 3 Functional Annotations

Value Algorithm Source
Binding--dependent transport system inner membrane component family protein n=162 Tax=Clostridium difficile RepID=C9XMR7_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 269.0
  • Bit_score: 525
  • Evalue 3.10e-146
  • rbh
sugar transporter permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 269.0
  • Bit_score: 525
  • Evalue 8.60e-147
ABC-type transport system, sugar-family permease {ECO:0000313|EMBL:CCL30786.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 269.0
  • Bit_score: 525
  • Evalue 4.30e-146

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 810
ATGAAAACAGCAAGAAGATTATTAAGTGATGGTTTACTTTTATTTATAGCGTGTGCAAGTTTGGTACCTTTTATATACATGTTGATAATATCATTGAAGATAACATATAACTCATATAGTTTGGATATATCTTTTTCAACAGTAACCCTTCAAAACTATATAGATATTTTTACTAAAAAAGGATTTGCACAATATTTTTTTAATACAGCAATAGTATCTTTTTCAGGTGTATTATTAAATTTAGTATTTAGTACATTAGCAGGATATTCTTTTGCGAAGATGGATTTTAAAGGTAGTGATAAGTTATTTTTATTTATGATAATGACTTTAATTATACCTTCCCAAGTTACAATGATACCACTATATATAATAATGAAACACTTAGGATGGATAAATAGTTATCTTGCACTTATTATGCCAATACCAACTGCATTTGGCGTATTTATAATGAGACAAGCTATTTTAGGAGTACCAAAAGAGTTATTAGAATCAGCAAAGATAGATGGTTGCTCGGATTTTAGAATTTTAATACAAATAGTGTTGCCTTTAATTAAACCAGCATTAATTACACTAGCAATATTTACTTTTATGGGAGCATGGAACGAGTTTATGTGGCCTCTTATAGCTACAACTAAAGATGCAATGAGAACATTAACAGTTGGATTATCTACTCTTAAGACATTCCAGATAACTAATTATGGACAGATGATGGCAGGGGCTACAATAACATTTTTACCTCCATTTATTTTCTATTTGATTTTACAGAGTAAATTTGTTGAAGGTGTGTCTTTGTCTGGTATAAAAGGTTAA
PROTEIN sequence
Length: 270
MKTARRLLSDGLLLFIACASLVPFIYMLIISLKITYNSYSLDISFSTVTLQNYIDIFTKKGFAQYFFNTAIVSFSGVLLNLVFSTLAGYSFAKMDFKGSDKLFLFMIMTLIIPSQVTMIPLYIIMKHLGWINSYLALIMPIPTAFGVFIMRQAILGVPKELLESAKIDGCSDFRILIQIVLPLIKPALITLAIFTFMGAWNEFMWPLIATTKDAMRTLTVGLSTLKTFQITNYGQMMAGATITFLPPFIFYLILQSKFVEGVSLSGIKG*