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NECEvent2014_2_3_scaffold_98_28

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(28052..28339)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, Lactose/Cellobiose specific IIB subunit n=194 Tax=Clostridium difficile RepID=C9XST3_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 188
  • Evalue 4.10e-45
PTS system, IIb component similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 188
  • Evalue 1.20e-45
PTS system, fructose/mannitol-family IIB component {ECO:0000313|EMBL:CCL31870.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 188
  • Evalue 5.70e-45

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 288
ATGTATAAAATTTTAATCGCATGTAGAGCAGGAGTTGGCTCAAGTTTAATGTTAAAAATAAAGACTCAACAAATTATTAAGGAAAATAACTTTCCAATTGAAGTAGAGCATGGTTCATTGGATTCACTAAATGGATTCAATGGAGATGCTGTAGAAACATTAATTGATGTTGCTGAAGAATTAAAAAATAAAAATTTGAAGTTTGATATAATTGGGATTCACAATATTGTTGACCGTAATGAAATAAAGACAGCACTAGAAAAATTCCTTGCTTCAAAAGAGGGATAA
PROTEIN sequence
Length: 96
MYKILIACRAGVGSSLMLKIKTQQIIKENNFPIEVEHGSLDSLNGFNGDAVETLIDVAEELKNKNLKFDIIGIHNIVDRNEIKTALEKFLASKEG*