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NECEvent2014_2_3_scaffold_98

Alias: 172_003_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_98_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100..951)
DNA (852bp) protein (284aa)
Putative phosphoesterase n=9 Tax=Clostridium difficile RepID=Q181K5_CLOD6 rbh
putative phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:CAJ70510.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(977..1915)
DNA (939bp) protein (313aa)
NAD dependent epimerase/dehydratase family protein n=205 Tax=Clostridium difficile RepID=C9XSK9_CLODC rbh
hypothetical protein
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EHJ28883.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_98_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2018..2668)
DNA (651bp) protein (217aa)
putative phosphatase (EC:3.1.3.-)
Phosphatase {ECO:0000313|EMBL:CKG68100.1}; EC=3.1.3.5 {ECO:0000313|EMBL:CKG68100.1};; Putative phosphatase {ECO:0000313|EMBL:CEK00323.1}; EC=3.1.3.- {ECO:0000313|EMBL:CEK00323.1};; TaxID=1496 species=
HAD hydrolase, IA, variant 1 family protein n=101 Tax=Clostridium difficile RepID=T3G3J0_CLODC rbh
NECEvent2014_2_3_scaffold_98_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2817..3005)
DNA (189bp) protein (63aa)
Ferredoxin n=213 Tax=Clostridium difficile RepID=C9XSL1_CLODC
ferredoxin
Ferredoxin {ECO:0000313|EMBL:CCL00083.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
NECEvent2014_2_3_scaffold_98_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3112..4296)
DNA (1185bp) protein (395aa)
Amidohydrolase {ECO:0000313|EMBL:CKG68048.1}; EC=3.5.2.3 {ECO:0000313|EMBL:CKG68048.1};; Putative hydrolase {ECO:0000313|EMBL:CEK00325.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri
Amidohydrolase family protein n=72 Tax=Clostridium difficile RepID=C9XSL2_CLODC rbh
amidohydrolase
NECEvent2014_2_3_scaffold_98_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4438..5355)
DNA (918bp) protein (306aa)
Uncharacterized protein n=151 Tax=Clostridium difficile RepID=C9XSL3_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE58598.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5377..6105)
DNA (729bp) protein (243aa)
ABC transporter family protein n=211 Tax=Clostridium difficile RepID=C9XSL4_CLODC rbh
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHJ28888.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_98_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6301..6501)
DNA (201bp) protein (67aa)
Uncharacterized protein n=220 Tax=Clostridium difficile RepID=C9XSL5_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL00087.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6626..7006)
DNA (381bp) protein (127aa)
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein n=164 Tax=Clostridium difficile RepID=C9XSL6_CLODC
glyoxalase
Uncharacterized protein {ECO:0000313|EMBL:CCL31850.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7279..8637)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=118 Tax=Clostridium difficile RepID=T3G132_CLODC rbh
Putative multidrug resistance protein {ECO:0000313|EMBL:CCL24086.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
multidrug resistance protein
NECEvent2014_2_3_scaffold_98_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9085..9537
DNA (453bp) protein (151aa)
Staygreen family protein n=157 Tax=Clostridium difficile RepID=T3FZ65_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL31852.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9694..10311)
DNA (618bp) protein (206aa)
Uncharacterized protein n=161 Tax=Clostridium difficile RepID=T3FYF5_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE58592.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10734..11546)
DNA (813bp) protein (271aa)
MerR regulatory family protein n=172 Tax=Clostridium difficile RepID=T3G250_CLODC rbh
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CAJ70522.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_98_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11622..13040)
DNA (1419bp) protein (473aa)
Sodium/hydrogen exchanger family protein n=185 Tax=Clostridium difficile RepID=T3G349_CLODC rbh
potassium/proton antiporter
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:EQE58661.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto
NECEvent2014_2_3_scaffold_98_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13524..14432)
DNA (909bp) protein (303aa)
Uncharacterized protein n=63 Tax=Clostridium difficile RepID=Q181L7_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE58563.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14703..15080
DNA (378bp) protein (126aa)
Uncharacterized protein n=17 Tax=Clostridium difficile RepID=Q181M0_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ70525.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_98_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15236..15685)
DNA (450bp) protein (150aa)
Acetyltransferase family protein n=42 Tax=Clostridium difficile RepID=T3G0I2_CLODC rbh
acyl-CoA N-acyltransferase
Putative acyl-CoA N-acyltransferase {ECO:0000313|EMBL:CAJ70526.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_98_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15852..16256)
DNA (405bp) protein (135aa)
YmaF family protein n=139 Tax=Clostridium difficile RepID=T3FYS0_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL31861.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16369..17235)
DNA (867bp) protein (289aa)
Pentapeptide repeats family protein n=6 Tax=Clostridium difficile RepID=T3FY11_CLODC rbh
hypothetical protein
Pentapeptide repeat protein {ECO:0000313|EMBL:CAJ70528.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
NECEvent2014_2_3_scaffold_98_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17805..18149)
DNA (345bp) protein (115aa)
PhnA family protein n=194 Tax=Clostridium difficile RepID=C9XSQ0_CLODC
putative phosphonoacetate hydrolase
Uncharacterized protein {ECO:0000313|EMBL:CCL31863.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_98_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18338..18955)
DNA (618bp) protein (206aa)
ABC-type transport system, ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKG67544.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKG67544.1};; ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CEK00341.1}; EC=3.6.3.- {
ABC-type transport system, ATP-binding protein n=97 Tax=Clostridium difficile RepID=Q181M4_CLOD6 rbh
NECEvent2014_2_3_scaffold_98_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18960..21122)
DNA (2163bp) protein (721aa)
ABC-type transport system, permease n=5 Tax=Clostridium difficile RepID=Q181M6_CLOD6 rbh
ABC-type transport system, permease
ABC-type transport system, permease {ECO:0000313|EMBL:CAJ70531.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_98_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21464..23971)
DNA (2508bp) protein (836aa)
Diguanylate cyclase domain protein n=6 Tax=Clostridium difficile RepID=T3FZR9_CLODC rbh
putative signaling protein
Putative signaling protein {ECO:0000313|EMBL:CAJ70532.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_98_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24449..25081)
DNA (633bp) protein (211aa)
4-hydroxy-2-oxoglutarate aldolase (EC:4.1.3.16)
2-keto-3-deoxy-6-phospho-gluconate aldolase {ECO:0000313|EMBL:CKG67444.1}; EC=4.1.2.21 {ECO:0000313|EMBL:CKG67444.1};; Putative 4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:CDS90321.1}; EC=4.1.
KDPG and KHG aldolase family protein n=27 Tax=Clostridium difficile RepID=T3FY20_CLODC rbh
NECEvent2014_2_3_scaffold_98_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25187..26092)
DNA (906bp) protein (302aa)
dapA4; Dihydrodipicolinate synthase 4 (DHDPS) (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=6 Tax=Clostridium difficile RepID=U4ANT6_CLODI rbh
NECEvent2014_2_3_scaffold_98_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26097..26696)
DNA (600bp) protein (200aa)
SIS domain protein n=166 Tax=Clostridium difficile RepID=T3G114_CLODC rbh
putative phosphosugar isomerase
SIS domain protein {ECO:0000313|EMBL:EQE58637.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_98_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26754..28025)
DNA (1272bp) protein (424aa)
PTS system sugar-specific permease component family protein n=176 Tax=Clostridium difficile RepID=C9XST2_CLODC rbh
PTS system ascorbate-specific transporter subunit IIC
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EQG73167.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi
NECEvent2014_2_3_scaffold_98_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28052..28339)
DNA (288bp) protein (96aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=194 Tax=Clostridium difficile RepID=C9XST3_CLODC
PTS system, IIb component
PTS system, fructose/mannitol-family IIB component {ECO:0000313|EMBL:CCL31870.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_98_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28354..30441)
DNA (2088bp) protein (696aa)
Transcription antiterminator, PTS operon regulator n=6 Tax=Clostridium difficile RepID=Q181N2_CLOD6 rbh
Transcription antiterminator, PTS operonregulator
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CAJ70538.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
NECEvent2014_2_3_scaffold_98_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30392..30547)
DNA (156bp) protein (52aa)
Uncharacterized protein n=164 Tax=Clostridium difficile RepID=T3FX93_CLODC
Uncharacterized protein {ECO:0000313|EMBL:CCL31872.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
Displaying items 1-30 of 46 in total

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