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NECEvent2014_2_3_scaffold_100_9

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(10789..11463)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system,spermidine/putrescine permease n=194 Tax=Clostridium difficile RepID=Q18AM6_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 434
  • Evalue 5.90e-119
  • rbh
potC; ABC-type transport system,spermidine/putrescinepermease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 434
  • Evalue 1.70e-119
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE67913.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 434
  • Evalue 8.30e-119

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 675
ATGGCAAGATGGAATGGATTTACATGGAAGTGGTATGGTCAATTACTTCAAAATGAGAGTATAATGAGTGCTTTATATTATACTATTGTAATAGCTATATTAGCGTCTGTAATATCTACAATAGTAGGAACTATAAGTGCTATAGGAATACATAAGATGAGAGGTAAGAGTAAGAAATTAATACTAAATGTAAACTATCTTCCTATTTTAAATACAGAGATAGTTACAGCAGTAGCTCTTATGAGTCTGTTTGTATTTGTAAAAATGGAATTTGGATTTACAACAATGCTATTGGCACATATAATGTTTTGTTTGCCATACGTTATACTTTCAGTTTTGCCAAAAATGAAGCAATTACCTGATAATATAGAAGATGCAGCTATGGACTTGGGAGCAACACCTATATACGCTCTTAGAAAAGTAATTTTACCACAAATAAAACCAGGTATAGTTTCTGGATTTTTAATTGCATTTACTATGTCAATAGATGACTTTATAATAAGTTTCTTTAATGCTGGAAATGGTGTAAGCAATCTTTCTATAGAAATCTATGGAATGGCTAGAAGAGGTATAAAACCTGAAATAAATGCATTATCAACAATAATGTTTGCAGTGGTTCTAGGTTTACTTTTACTAGCTAATAAAAAAGAATCTATAGTAAGGGGGATTAAATAA
PROTEIN sequence
Length: 225
MARWNGFTWKWYGQLLQNESIMSALYYTIVIAILASVISTIVGTISAIGIHKMRGKSKKLILNVNYLPILNTEIVTAVALMSLFVFVKMEFGFTTMLLAHIMFCLPYVILSVLPKMKQLPDNIEDAAMDLGATPIYALRKVILPQIKPGIVSGFLIAFTMSIDDFIISFFNAGNGVSNLSIEIYGMARRGIKPEINALSTIMFAVVLGLLLLANKKESIVRGIK*