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NECEvent2014_2_3_scaffold_100

Alias: 172_003_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_100_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(244..1218)
DNA (975bp) protein (325aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase {ECO:0000313|EMBL:CKG91750.1}; EC=3.2.1.- {ECO:0000313|EMBL:CKG91750.1};; Putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase {ECO:0000
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein n=48 Tax=Clostridium difficile RepID=T3I0M4_CLODC rbh
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
NECEvent2014_2_3_scaffold_100_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1296..2420)
DNA (1125bp) protein (375aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase(UDP-GlcNAc-2-epimerase) (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CKG91727.1}; EC=5.1.3.14 {ECO:0000313|EMBL:CKG91727.1};; UDP-N-acetylglucosamine 2-epimerase (UDP-GlcNAc-2-epimerase) {ECO:0000313|EMBL:CDS84523.1
UDP-N-acetylglucosamine 2-epimerase n=101 Tax=Clostridium difficile RepID=T3I3T4_CLODC rbh
NECEvent2014_2_3_scaffold_100_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2474..3547)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=67 Tax=Clostridium difficile RepID=Q18AN4_CLOD6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ97590.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_100_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3596..5677)
DNA (2082bp) protein (694aa)
Bacterial cellulose synthase subunit n=48 Tax=Clostridium difficile RepID=T2U3P9_CLODI rbh
Putative cell wall anchored protein {ECO:0000313|EMBL:CAJ67872.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
putative cell wall anchored protein
NECEvent2014_2_3_scaffold_100_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5700..6956)
DNA (1257bp) protein (419aa)
family 2 glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase 2 family protein n=144 Tax=Clostridium difficile RepID=T3I3V1_CLODC rbh
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQG78221.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_100_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7005..8669)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T2U3S2_CLODI rbh
Cell wall anchored protein {ECO:0000313|EMBL:CKG91624.1}; Putative cell wall anchored protein {ECO:0000313|EMBL:CEJ97587.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptos
putative cell wall anchored protein
NECEvent2014_2_3_scaffold_100_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8659..9507)
DNA (849bp) protein (283aa)
Diguanylate cyclase domain protein n=195 Tax=Clostridium difficile RepID=G6BUH6_CLODI rbh
signaling protein
Putative signaling protein {ECO:0000313|EMBL:CAJ67869.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_100_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9737..10789)
DNA (1053bp) protein (351aa)
Bacterial extracellular solute-binding family protein n=57 Tax=Clostridium difficile RepID=T3I0Y5_CLODC rbh
potD; ABC-type transport system,spermidine/putrescinesolute-binding protein
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EQG78172.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
NECEvent2014_2_3_scaffold_100_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10789..11463)
DNA (675bp) protein (225aa)
ABC-type transport system,spermidine/putrescine permease n=194 Tax=Clostridium difficile RepID=Q18AM6_CLOD6 rbh
potC; ABC-type transport system,spermidine/putrescinepermease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE67913.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_100_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11568..12404)
DNA (837bp) protein (279aa)
Binding--dependent transport system inner membrane component family protein n=190 Tax=Clostridium difficile RepID=C9XMI1_CLODC rbh
spermidine/putrescine ABC transporter permease
ABC-type transport system,spermidine/putrescine permease {ECO:0000313|EMBL:CCL29045.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.
NECEvent2014_2_3_scaffold_100_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12406..13449)
DNA (1044bp) protein (348aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostr
Spermidine/putrescine import ATP-binding protein PotA n=202 Tax=Clostridium difficile RepID=POTA_CLOD6 rbh
spermidine/putrescine ABC transporter, ATP-binding protein
NECEvent2014_2_3_scaffold_100_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13468..14007)
DNA (540bp) protein (180aa)
Helix-turn-helix family protein n=220 Tax=Clostridium difficile RepID=C9XMH9_CLODC rbh
transcriptional regulator
Putative transcriptional regulator, HTH {ECO:0000313|EMBL:CCL29043.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc
NECEvent2014_2_3_scaffold_100_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14443..15132)
DNA (690bp) protein (230aa)
Uncharacterized protein n=57 Tax=Clostridium difficile RepID=T3HZC8_CLODC rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEJ97580.1}; Uncharacterized BCR%2C YitT family COG1284 {ECO:0000313|EMBL:CKG91447.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
NECEvent2014_2_3_scaffold_100_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15585..17492)
DNA (1908bp) protein (636aa)
CotH family protein n=39 Tax=Clostridium difficile RepID=T3I378_CLODC rbh
Inner spore coat protein H {ECO:0000313|EMBL:CKG91412.1}; Putative spore coat protein {ECO:0000313|EMBL:CEJ97579.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoco
putative spore coat protein
NECEvent2014_2_3_scaffold_100_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17509..18183)
DNA (675bp) protein (225aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T3HYB3_CLODC rbh
putative membrane protein
Twin-arginine translocating C-subunit {ECO:0000313|EMBL:CKG91391.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_100_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18300..18989)
DNA (690bp) protein (230aa)
Uncharacterized protein n=70 Tax=Clostridium difficile RepID=Q18AM2_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL21112.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_100_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19322..21184)
DNA (1863bp) protein (621aa)
multidrug family ABC transporter ATP-binding protein/permease (EC:3.6.3.-)
ABC transporter ATP-binding protein/permease {ECO:0000313|EMBL:CKG91298.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKG91298.1};; ABC-type transport system, multidrug-familyATP-binding protein/permease {ECO:0000
ABC transporter family protein n=5 Tax=Clostridium difficile RepID=T3HYH2_CLODC rbh
NECEvent2014_2_3_scaffold_100_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21221..22948)
DNA (1728bp) protein (576aa)
ABC-type transport system, multidrug-familyATP-binding protein/permease (EC:3.6.3.-)
ABC-type transport system, multidrug-family ATP-binding protein/permease {ECO:0000313|EMBL:CAJ67858.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ67858.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridi
ABC transporter family protein n=53 Tax=Clostridium difficile RepID=T3HZP0_CLODC rbh
NECEvent2014_2_3_scaffold_100_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23021..23851
DNA (831bp) protein (277aa)
MerR regulatory family protein n=60 Tax=Clostridium difficile RepID=T3I1D6_CLODC rbh
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCL21109.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_100_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24214..25827)
DNA (1614bp) protein (538aa)
Two-component sensor histidine kinase n=167 Tax=Clostridium difficile RepID=Q18AL7_CLOD6 rbh
Two-component sensor histidine kinase {ECO:0000313|EMBL:CAJ67856.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
Two-component sensor histidine kinase
NECEvent2014_2_3_scaffold_100_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26032..27519)
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CKG91151.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptos
His Kinase A domain protein n=75 Tax=Clostridium difficile RepID=T3I1J3_CLODC rbh
two-component system sensor histidine kinase
NECEvent2014_2_3_scaffold_100_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27521..28225)
DNA (705bp) protein (235aa)
Response regulator n=161 Tax=Clostridium difficile RepID=T3I4Q3_CLODC rbh
Two-component response regulator
Response regulator {ECO:0000313|EMBL:EQE67918.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_100_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28781..29200
DNA (420bp) protein (140aa)
Uncharacterized protein n=139 Tax=Clostridium difficile RepID=G6BUJ2_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ67853.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_100_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29332..30081)
DNA (750bp) protein (250aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomera
Glucosamine-6-phosphate deaminase n=184 Tax=Clostridium difficile RepID=NAGB_CLOD6 rbh
NECEvent2014_2_3_scaffold_100_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30180..31313)
DNA (1134bp) protein (378aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase(GlcNAc 6-P deacetylase) (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1151268 species
N-acetylglucosamine-6-phosphate deacetylase n=48 Tax=Clostridium difficile RepID=T3I1N2_CLODC rbh
NECEvent2014_2_3_scaffold_100_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31323..32057)
DNA (735bp) protein (245aa)
Bacterial regulatory s, gntR family protein n=169 Tax=Clostridium difficile RepID=C9XMG5_CLODC rbh
GntR-family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQE67916.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
NECEvent2014_2_3_scaffold_100_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32352..33194
DNA (843bp) protein (281aa)
S1 domain protein n=34 Tax=Clostridium difficile RepID=C9XMG4_CLODC rbh
S1 RNA binding domain
S1 rna binding domain protein {ECO:0000313|EMBL:CAJ67849.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_100_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33323..33586)
DNA (264bp) protein (88aa)
Uncharacterized protein n=193 Tax=Clostridium difficile RepID=C9YJV9_CLODR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL28966.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_100_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33736..34125)
DNA (390bp) protein (130aa)
Acetyltransferase family protein n=70 Tax=Clostridium difficile RepID=T3I508_CLODC
putative acyl-CoA N-acyltransferase
Putative acyl-CoA N-acyltransferase {ECO:0000313|EMBL:CAJ67847.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_100_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34417..35598)
DNA (1182bp) protein (394aa)
putative NAD-dependent malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=77 Tax=Clostridium difficile RepID=T3I3V2_CLODC rbh
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EQE67906.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto
Displaying items 1-30 of 38 in total

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