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NECEvent2014_2_3_scaffold_104_22

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(22498..23220)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=205 Tax=Clostridium difficile RepID=C9XN13_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 460
  • Evalue 1.40e-126
  • rbh
sigE; sporulation sigma factor SigE similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 460
  • Evalue 4.00e-127
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 460
  • Evalue 2.00e-126

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 723
ATGTTACGATTGAAAGAAAGAATAATAAGCTTTATTACTATGTTAGGTATTAAATTAAAAATAATAAAGCCAAAGGGAATATACTATATGGGAGGGGCAAATATACTTCCTCCTCCATTGAAACCAGAAGAAGAAATGGAGCTTTTACAAAAGCTAGAAACAGATGAAAGTGTAAAGTCAATTTTAATAGAAAGAAATCTTAGATTAGTAGTCTACATATCGAGAAAATTTGAAAATACAGGTATAGATGTAGAAGATTTGATTTCAATAGGAACTATAGGTTTGATAAAAGCAGTTAATACTTTTAAACTGAATAAAAATATAAAATTGGCAACTTATGCTTCGAGATGTATAGAAAATGAAATATTAATGTACTTAAGAAAAAATAATAAAAAGAAAACAGAAGTATCATTTGATGAACCTTTAAATATAGATTTAGATGGAAACGAACTTTTATTATCTGATGTATTGGGTACAGAAAATGATGAAATATACAAAATAATTGAAGAAGAAATAGATAGAGATTTGTTGGTTATGGCACTTGACAGATTAAGTGACAGAGAAAAGCAAATTATGGAATTAAGATTTGGTCTTATTGATAAAGGTATTGAAAAAACACAAAAAGAAGTTGCTGGAATGCTTGGAATATCACAGTCCTACATATCTAGACTTGAAAAGAAAATAATCTCAAGGTTGCAAAAAGAAATGAAAAAATTTGTATAA
PROTEIN sequence
Length: 241
MLRLKERIISFITMLGIKLKIIKPKGIYYMGGANILPPPLKPEEEMELLQKLETDESVKSILIERNLRLVVYISRKFENTGIDVEDLISIGTIGLIKAVNTFKLNKNIKLATYASRCIENEILMYLRKNNKKKTEVSFDEPLNIDLDGNELLLSDVLGTENDEIYKIIEEEIDRDLLVMALDRLSDREKQIMELRFGLIDKGIEKTQKEVAGMLGISQSYISRLEKKIISRLQKEMKKFV*