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NECEvent2014_2_3_scaffold_105_12

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(12256..12936)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory family protein n=114 Tax=Clostridium difficile RepID=T3G9A7_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 226.0
  • Bit_score: 451
  • Evalue 3.60e-124
  • rbh
Two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 226.0
  • Bit_score: 451
  • Evalue 1.00e-124
Two-component response regulator {ECO:0000313|EMBL:CCL23432.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 226.0
  • Bit_score: 451
  • Evalue 5.10e-124

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGTATAGAATTTTATTAGTAGAGGACGATATTGATTTATCAAAAGAGATTGCATTAGCACTTGAAAAATGGGGATTTAAAGTAGAATTAATTGATGATTTTGAGGTAGTATTAGATGAATTTATAGATAAAAAACCAGATGTAGTACTTTTAGATGTAAATTTACCATTATATAATGGATTTTACTGGTGCGAAAAAATAAGAGCTATTTCAAATGTACCATTAATATTTTTATCATCAAGAGATTCTGATATGGATTTAATAATGGGTATAAATAATGGAGCAGATGATTACATTACCAAACCATTTTCTATAGAAATATTGGTTACCAAAATAAATGGTATAATAAGAAGAGTCTATAATTATAGTGATTCTAATAGTATTTTGTATTGTGAAGATTTGATGTTTGATGTGGGGAAAGGGATTATAAAACATAAGTATAAGGATAAAAGTATAGAGTTGACTAAAAACGAAATAAAAATTTTAACATTATTATTAAAAAATAAGAATAGGGTTGTATCAAGGGAAAGTCTTATGATGACTCTATGGGATAATGATGAGTTTGTGACAGACAATGCACTTACTGTAAATATGAATAGATTGAGAAGTAAAGTTAAAGAACTAGGTTTTGATGATTTTATAAAAACTAAGAAGGGGATAGGATATATAATACAATGCTAG
PROTEIN sequence
Length: 227
MYRILLVEDDIDLSKEIALALEKWGFKVELIDDFEVVLDEFIDKKPDVVLLDVNLPLYNGFYWCEKIRAISNVPLIFLSSRDSDMDLIMGINNGADDYITKPFSIEILVTKINGIIRRVYNYSDSNSILYCEDLMFDVGKGIIKHKYKDKSIELTKNEIKILTLLLKNKNRVVSRESLMMTLWDNDEFVTDNALTVNMNRLRSKVKELGFDDFIKTKKGIGYIIQC*