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NECEvent2014_2_3_scaffold_86_24

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 30257..33205

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=6 Tax=Clostridium difficile RepID=T3IKL3_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 982.0
  • Bit_score: 1911
  • Evalue 0.0
  • rbh
Transcription antiterminator, PTS operonregulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 982.0
  • Bit_score: 1911
  • Evalue 0.0
Transcription antiterminator {ECO:0000313|EMBL:CKH92784.1}; Transcription antiterminator, PTS operonregulator {ECO:0000313|EMBL:CEJ96542.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 982.0
  • Bit_score: 1911
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2949
ATGAGGCAAAGAATAAAAAACTTAATTGAAAATGAAGATAAGAAAAATCCTTTAACAGATGAAGCGATTTCAAGTAGGTTAAATATTCGAAGAGAAGATGTTACCTTTTTGAGAAATGAGTTAAAAATAGAAGATTCAAGACAAAGAAGAAAAGTTGTTTTAATTAAAGCTATAAAAGATATTTTAAAAGAAGAAAAAACTATAAATAAAAATGATATAACAAGAAGATTAAACAGCATTGGGTTTACAGTATCAAGATTTACAGTCATACAATACTTAAAAGAGATTCAAGATTCTGGTGACCTAAAACTTGATAAAGAGAGTGATGATAAAAAAGAAAAAATAATCAATAATAGAGAAAATAAAGATATAGCATTTGATAAACTTATAGGTAGTAGTGGTAGCTTAAGTACAATTATAAAACTAGCCAAAGCAGCAATTCTTTATCCACCTCATGGTCTTCATACTATTATTATGGGGCCAACTGGTGTTGGAAAGAGTGAGTTAGCAGAGTGTATGTATAAATTTGCAGTAGAATCATCCAGATTCCCTAAGAATGCACCATTTATAGTTTTTAATGCAGCAGATTATTCAGAGAATCCACAGCTTTTGCTATCACAGTTATTTGGACACGTTAAAGGTGCTTTTACAGGAGCTGATGAGAACAAAGAAGGATTAGTATCAAAGGCAGATGGAGGAATATTGTTTATAGATGAAATACATAGATTACCTCATGAAGGTCAAGAAATACTATTTCAACTGATTGATAAAGGTATGGTCAGAAAGTTAGGAGAAACAAGACTAACACATAAAATAGATGTAATGATTATTTCAGCAACTTCTGAGCCAATAGATTCTCATTTACTTAATACATTTAAAAGACGTATACCTGTAACAATTGAAATACCAGAATTAGTTGCAAGACCATTAAATGAGAGGTTTGACATTATAAATAATTTCTTCTTAATAGAAGCTCAAAGAATGGGAGCAAACATACATATAAAGTCAGATGTATTAAAAGCTCTTATGCTTTACGATTGTATAGGTAATGTAGGTCAACTTAGAAGTGATATTCAAGTAGCTTGTGCTAGGGGACTATTAAACCAACTTACAAACAAACTAAAAGAAGTAAATATAAGCATATCAGATGTACCTGGATATGTAAAACAAGGTCTTATAAAAATCAGAAATTGTAGAGGCAAAATAGAAAATTATGTAGATGGGGATTTAATTATAGATTCAAATCTTCAAGGTGAGATAGAAAAGAAAAATGAAGATATATATACTTTTCCAGATGAAATATACAAACTTACTGAAAGAAGACATATTGATTTATTGGAACAAGGTTTAGATTTTGATGTTATAAATAGAATCATTGGAGGAGAATTAGAAAGTTGCATTCAAAAATACATAAAACAAGTTAAAAAAGTTTCTATTAGTAACAATCTTCCAGATATAAGTCCAATTGTTGGAAAATATATCGTAGAGCTAACTTATGAAGTAATCAAAATAGCATCACAATACCTAAGTTCACTAGAACCGAATCTACATTTATGTTTAGCAGTTCACCTAAAAGCAGCTTTTGAGAGATTAAAAGAAGGAAAAGTAATATCAAATGCTCATTTGAAAGAAATAATAGGAAATTATCCAGTAGAATATTCTGTAGCAGAAAAGGTAGCTCAATATTTAAAGGAAAGATATAACATAAACTTACCAAAAGAAGAAATAGGTATAATAGCAATATATTTTAAAATGAGTAGTAGAAGAGATATGTCTGAACAAAAAAAGATAGGTGTACTTCTTATGGCTCACGGAAGAGTAGCATCTTCTGTATGTGAGGTTACAAATAAACTATTAGGAATTAATCACGCAAGGTATTTAGATATGCCATTTGAGAAGAAGCCGGAAGAAATGATTGAAGAAGCTACTACAATAATAAAAGATATTGATGAAGGTAGAGGTGTGATTATATTAGTAGATATGGGTTCACTTTCATATTTTGGAGATATTATTTCTGGAAAGACTGGAATTAATATAAGGACAATATCTAGATTTGATACATTGCTTTCTATAGAGGTTATACGAAGAGCAGTTTTACCAGATTTAACAATAGACGAGATAGTTGATGAAGTTAAAGGTATAGAGCCACAAGTAAAAGAAAAGGTTAGTAAATGTAACAATACAAAAGTAGATTTTAGAAAACCTATAATTTTAACATTATGTATTACTGGATTAGGGGGAGCTTGTAAGATAAAAAAAATCTTAGAGGAAAATATTAAAAGTATAACTGAAAAGGTTGATATAGAACCTATAGGTATGATTGAATATCCAAGTCTTGATTTAGAGATAAAACAAATAAGCAATGATAAAAATGTAATTGCCATAGTTGGAACAATTGACCCTCAGATATCAAATATCCCTTTTTTTAGTCTAGTAGACATAAATGATAAAGCGAAGTTAAATCAAATAAATAACCTAATTGATACAAATCAAATTGGTGATACAAATAAAAAATATGAATTATCAGATTTAATACATAAAGAAGATATATTTGTGGATTTACAGGTTAAATCAAAAGAAGAAGTTCTAAAATATATGAGTAAAAAACTTAGAGAGAAAGGTTATGTGACAAAAAATTTCTATAAAAAAGTAGTGGAAAGAGATAACTTATTTCCAACTGAATTATCAGATGAAATAGCAATACCTCACACAGATGGAATAGATGTAATTAGGCCAGCTATAAGTATAGCCATCTTAAAGAAGCCTATTGTGTGGAGTAAAAGTAAAGTAAAAATAATACTTTTATTAGCTGTAGACCAAAAGTGTTTTAATCCATTAAGCACTCTACTCTCATTTATAGAAACAGATGAATTTAAGAAGATAAAAAACATTAAAGATAGAGATTTTATTAGGGAGATGATATTAGATGGAGTCAATGAAAATAATTAG
PROTEIN sequence
Length: 983
MRQRIKNLIENEDKKNPLTDEAISSRLNIRREDVTFLRNELKIEDSRQRRKVVLIKAIKDILKEEKTINKNDITRRLNSIGFTVSRFTVIQYLKEIQDSGDLKLDKESDDKKEKIINNRENKDIAFDKLIGSSGSLSTIIKLAKAAILYPPHGLHTIIMGPTGVGKSELAECMYKFAVESSRFPKNAPFIVFNAADYSENPQLLLSQLFGHVKGAFTGADENKEGLVSKADGGILFIDEIHRLPHEGQEILFQLIDKGMVRKLGETRLTHKIDVMIISATSEPIDSHLLNTFKRRIPVTIEIPELVARPLNERFDIINNFFLIEAQRMGANIHIKSDVLKALMLYDCIGNVGQLRSDIQVACARGLLNQLTNKLKEVNISISDVPGYVKQGLIKIRNCRGKIENYVDGDLIIDSNLQGEIEKKNEDIYTFPDEIYKLTERRHIDLLEQGLDFDVINRIIGGELESCIQKYIKQVKKVSISNNLPDISPIVGKYIVELTYEVIKIASQYLSSLEPNLHLCLAVHLKAAFERLKEGKVISNAHLKEIIGNYPVEYSVAEKVAQYLKERYNINLPKEEIGIIAIYFKMSSRRDMSEQKKIGVLLMAHGRVASSVCEVTNKLLGINHARYLDMPFEKKPEEMIEEATTIIKDIDEGRGVIILVDMGSLSYFGDIISGKTGINIRTISRFDTLLSIEVIRRAVLPDLTIDEIVDEVKGIEPQVKEKVSKCNNTKVDFRKPIILTLCITGLGGACKIKKILEENIKSITEKVDIEPIGMIEYPSLDLEIKQISNDKNVIAIVGTIDPQISNIPFFSLVDINDKAKLNQINNLIDTNQIGDTNKKYELSDLIHKEDIFVDLQVKSKEEVLKYMSKKLREKGYVTKNFYKKVVERDNLFPTELSDEIAIPHTDGIDVIRPAISIAILKKPIVWSKSKVKIILLLAVDQKCFNPLSTLLSFIETDEFKKIKNIKDRDFIREMILDGVNENN*