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NECEvent2014_2_3_scaffold_93_32

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(32077..32907)

Top 3 Functional Annotations

Value Algorithm Source
dapF; Diaminopimelate epimerase (DAP epimerase) (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 276.0
  • Bit_score: 563
  • Evalue 3.80e-158
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 276.0
  • Bit_score: 563
  • Evalue 1.50e-157
Diaminopimelate epimerase n=132 Tax=Clostridium difficile RepID=T3GHQ0_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 276.0
  • Bit_score: 563
  • Evalue 1.00e-157
  • rbh

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 831
ATGAAATTTTGGAAACTACATGGAATAGGAAATGATTTTATAGCAATAGATGGAAGATTCGACCAGATAAATCCATCTGATTATACTGCTTTAGCAAAAAAAGTATGCCATAGAAGATTTTCTGTAGGAGCGGATGGATTGTTAGTTGTGAAAGATTCAAAAGTTGCAGATGTAGAAATGGTATATTATAATTCTGATGGTTCAAGAGCAGCTATGTGTGGAAATGGCCTTAGATGTTTTTGTAAATTTGTTTATGATAATTGTATAGTTAAAAAAGAAAGTTTTACAGTAGACACATTAGATGGTATAAAAGATATAAAAGTAAATCTTACCAATAGAGAAATAAACTCTATAAGAGTCAATATGGGAAAAGGAAGTTTTATAGCTAAGGACGTTCCTGTACTTACAAATAAAGAACGTTTTGTGCAAGAAAGTATAAAGGTTTTAGATAGGGAGCTTAAAGTTACTTCTATGTTGATGGGGGTTCCTCATACAGTAGTTATAGTAGATGAATTAGATGTAGATGATGTTTGTAAATATGGAAAAGAGATTGAAAATAATAAAATATTTCCTGAAAAAACGAATGTAAATTTTGTAAAGGTAGAAGATAAGTATAATATACATGTTTATACTTGGGAAAGAGGTTGTGGATATACTTTAGGTTGTGGTACTGGTATGACTGCATCAGCAATAGTGTGCAATTTACTTAATATGGTAGAAAGTAGTGTAAATGTAACGTCTCAAGGTGGAACAGTTAAAATAGATGTAGGAGATTTCTCTTATATGACAGGTCCAGCAGTAAAAATATGTGAAGGTATTTTGGAGGTTTAA
PROTEIN sequence
Length: 277
MKFWKLHGIGNDFIAIDGRFDQINPSDYTALAKKVCHRRFSVGADGLLVVKDSKVADVEMVYYNSDGSRAAMCGNGLRCFCKFVYDNCIVKKESFTVDTLDGIKDIKVNLTNREINSIRVNMGKGSFIAKDVPVLTNKERFVQESIKVLDRELKVTSMLMGVPHTVVIVDELDVDDVCKYGKEIENNKIFPEKTNVNFVKVEDKYNIHVYTWERGCGYTLGCGTGMTASAIVCNLLNMVESSVNVTSQGGTVKIDVGDFSYMTGPAVKICEGILEV*