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NECEvent2014_2_3_scaffold_96_28

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(25694..26644)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system / permease component family protein n=26 Tax=Clostridium difficile RepID=T3HB21_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 316.0
  • Bit_score: 599
  • Evalue 2.60e-168
  • rbh
ABC-type transport system, sugar-familypermease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 316.0
  • Bit_score: 599
  • Evalue 7.20e-169
ABC-type transport system, sugar-family permease {ECO:0000313|EMBL:CAJ68453.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 316.0
  • Bit_score: 599
  • Evalue 3.60e-168

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 951
ATGAAGAAAGCTTTTGAGAAGTTAAATTTAAGAGATTATGGAGTATTATTAGGTTTTTTAGCTTTATGTATAGCTATAAGTATTGCAACTCCATCATTTTTAGGTAAACAAAATATACTTAATCTTTTACGACAATCTTCTATAATTGGAATAATTTCAGCAGGTATGACTTTTGTTATAATATCTGGAAACTTTGATATATCAGTTGGAGCAGTAGCAGCTCTTGCAGGTGCTATAACAATGAAATTTGCGACTGGTGGAACCAATTTGTTTGCATCCATGTTCTTAGGTGTAGCGATTTGTGCAGTAATAGGATTAATCAATGGTATAGTAGTTGCAAAGATAAATGTACCATCATTAATAGCTACTATGGCTATGGTCACTATTGTAAGAGGATTGCTGTTGATGCTTACAGGAGGATATCCAATTACTGAAAATATACCAATACTTGATTACATTGGAAATGGATATTTGTTTAATATACCAATACCAGTAGTAATTTTCTTTATAGTGGTGTTAGTTTCATTTATTGTACTTAATAAAACTAAGTTTGGTAGATATGTTTATTCTGTAGGAGGGAATCAAGAAGCAAGTAAACTTAATGGTATAAATGTAGATTCTCACAAAGTGAAAGTGTTTATTATTAATGCTGTACTTGCAGGAATAGCTGGAATCGTACTAACAGGAAGACTTGGGACTGCAACTGCGATTGCAGGTGAAGGATATGATATGGATGCAATTGCATCTGTAGTAATAGGAGGTACATCAGTGGCAGGAGGTTCTGGTTCTGTACTTAAAACTGTTATAGGAGTATTACTTATGAGTGTTATAAACAACAGTTTTAATCTTCTTGGAATAGATGTATATTTCCAGTACATATTTAAAGGATTAATAATTTTAGCAGCAGTTGGATTTGATTCTTATAGCAAGAAAAAACTTGCTTCAAGATAA
PROTEIN sequence
Length: 317
MKKAFEKLNLRDYGVLLGFLALCIAISIATPSFLGKQNILNLLRQSSIIGIISAGMTFVIISGNFDISVGAVAALAGAITMKFATGGTNLFASMFLGVAICAVIGLINGIVVAKINVPSLIATMAMVTIVRGLLLMLTGGYPITENIPILDYIGNGYLFNIPIPVVIFFIVVLVSFIVLNKTKFGRYVYSVGGNQEASKLNGINVDSHKVKVFIINAVLAGIAGIVLTGRLGTATAIAGEGYDMDAIASVVIGGTSVAGGSGSVLKTVIGVLLMSVINNSFNLLGIDVYFQYIFKGLIILAAVGFDSYSKKKLASR*