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NECEvent2014_2_3_scaffold_96

Alias: 172_003_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_96_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

224..1141
DNA (918bp) protein (306aa)
Uncharacterized protein n=142 Tax=Clostridium difficile RepID=T3HA44_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE04124.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_96_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1283..2464)
DNA (1182bp) protein (394aa)
Amidohydrolase family protein n=165 Tax=Clostridium difficile RepID=T3H5A9_CLODC rbh
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:CCL29812.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_96_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2830..4098)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=24 Tax=Clostridium difficile RepID=Q186G6_CLOD6 rbh
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH08287.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98203.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_96_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4109..4921)
DNA (813bp) protein (271aa)
Uncharacterized protein n=118 Tax=Clostridium difficile RepID=Q186G3_CLOD6 rbh
conserved hypothetical protein
ABC-2 transporter family protein {ECO:0000313|EMBL:EQI00027.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_3_scaffold_96_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4930..6129)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=60 Tax=Clostridium difficile RepID=Q186G4_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65898.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_96_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6141..6965)
DNA (825bp) protein (275aa)
ABC-type transport system, multidrug-family permease n=118 Tax=Clostridium difficile RepID=Q186G5_CLOD6 rbh
ABC-type transport system, multidrug-familypermease
Putative membrane protein {ECO:0000313|EMBL:EQE65906.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_96_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6958..7674)
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH08202.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH08202.1};; ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CDS86833
ABC transporter, ATP-binding protein n=175 Tax=Clostridium difficile RepID=C9XP50_CLODC rbh
ABC transporter ATP-binding protein
NECEvent2014_2_3_scaffold_96_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7746..8102)
DNA (357bp) protein (119aa)
Bacterial regulatory s, gntR family protein n=188 Tax=Clostridium difficile RepID=C9XP49_CLODC
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQG76008.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
NECEvent2014_2_3_scaffold_96_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8458..8916
DNA (459bp) protein (153aa)
GyrI-like small molecule binding domain protein n=147 Tax=Clostridium difficile RepID=T3H8Q9_CLODC rbh
hypothetical protein
GyrI-like small molecule binding domain protein {ECO:0000313|EMBL:EQE65865.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_96_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8920..9882
DNA (963bp) protein (321aa)
multidrug family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=114 Tax=Clostridium difficile RepID=T3HAW4_CLODC rbh
ABC transporter family protein {ECO:0000313|EMBL:EQI00021.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_96_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9876..10625
DNA (750bp) protein (250aa)
ABC-type transport system, multidrug-family permease n=57 Tax=Clostridium difficile RepID=Q186F6_CLOD6 rbh
ABC-type transport system, multidrug-familypermease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_3_scaffold_96_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10691..10993)
DNA (303bp) protein (101aa)
Lichenan-specific phosphotransferase enzyme IIB component n=153 Tax=Clostridium difficile RepID=T3H5R4_CLODC
PTS system, lactose/cellobiose-family IIBcomponent
PTS system, lactose/cellobiose-family IIB component {ECO:0000313|EMBL:CCL21747.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
NECEvent2014_2_3_scaffold_96_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11132..11764)
DNA (633bp) protein (211aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000255|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000255|HAMAP-Rule:MF
Thiamine-phosphate synthase n=133 Tax=Clostridium difficile RepID=THIE_CLOD6 rbh
NECEvent2014_2_3_scaffold_96_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11787..12575)
DNA (789bp) protein (263aa)
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethy
Hydroxyethylthiazole kinase n=39 Tax=Clostridium difficile RepID=THIM_CLOD6 rbh
NECEvent2014_2_3_scaffold_96_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12599..13393)
DNA (795bp) protein (265aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EQE65892.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EQE65892.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
Phosphomethylpyrimidine kinase n=175 Tax=Clostridium difficile RepID=C9XMJ1_CLODC rbh
thiD; phosphomethylpyrimidine kinase
NECEvent2014_2_3_scaffold_96_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13678..13989)
DNA (312bp) protein (104aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=T2U194_CLODI
endonuclease
Putative excinuclease ABC-like {ECO:0000313|EMBL:CCL29798.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_96_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14274..15524
DNA (1251bp) protein (417aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=Q186F3_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ98189.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_96_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15721..16590
DNA (870bp) protein (290aa)
map2; Methionine aminopeptidase Map2 (MAP) (PeptidaseM) (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=130 Tax=Clostridium difficile RepID=T3HAQ9_CLODC rbh
NECEvent2014_2_3_scaffold_96_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16644..16832)
DNA (189bp) protein (63aa)
Ferredoxin n=212 Tax=Clostridium difficile RepID=T3H5X5_CLODC
ferredoxin
Ferredoxin {ECO:0000313|EMBL:EQE65903.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
NECEvent2014_2_3_scaffold_96_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16992..17582)
DNA (591bp) protein (197aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CBE04093.1}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridial
Serine acetyltransferase n=200 Tax=Clostridium difficile RepID=T3H7G6_CLODC rbh
cysA; serine acetyltransferase
NECEvent2014_2_3_scaffold_96_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17609..18517)
DNA (909bp) protein (303aa)
O-acetyl-serine thiol-lyase A (O-acetyl-sulfhydrylase)(OAS-TL) {ECO:0000313|EMBL:CCL21738.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CCL21738.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clost
Cysteine synthase A n=170 Tax=Clostridium difficile RepID=C9XKX8_CLODC rbh
putative O-acetylserine sulfhydrylase
NECEvent2014_2_3_scaffold_96_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18754..19380)
DNA (627bp) protein (209aa)
kdpC; Potassium-transporting ATPase C chain (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase C chain n=67 Tax=Clostridium difficile RepID=ATKC_CLOD6 rbh
NECEvent2014_2_3_scaffold_96_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19399..21456)
DNA (2058bp) protein (686aa)
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=193 Tax=Clostridium difficile RepID=Q186E6_CLOD6 rbh
NECEvent2014_2_3_scaffold_96_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21481..23157)
DNA (1677bp) protein (559aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
kdpA; Potassium-translocating ATPase A chain (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=28 Tax=Clostridium difficile RepID=Q186E7_CLOD6 rbh
NECEvent2014_2_3_scaffold_96_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23305..23400)
DNA (96bp) protein (32aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=U3UP29_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK90404.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_96_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23707..24339)
DNA (633bp) protein (211aa)
Uncharacterized protein n=198 Tax=Clostridium difficile RepID=D5Q6Q9_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCK97924.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_96_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24711..25673)
DNA (963bp) protein (321aa)
Periplasmic binding s and sugar binding domain of LacI family protein n=137 Tax=Clostridium difficile RepID=C9XJB6_CLODC rbh
ribose ABC transporter substrate-binding protein
ABC-type transport system, sugar-family extracellular solute-binding protein {ECO:0000313|EMBL:CDS87122.1}; ABC-type transport system, sugar-familyextracellular solute-binding protein {ECO:0000313|EMB
NECEvent2014_2_3_scaffold_96_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25694..26644)
DNA (951bp) protein (317aa)
Branched-chain amino acid transport system / permease component family protein n=26 Tax=Clostridium difficile RepID=T3HB21_CLODC rbh
ABC-type transport system, sugar-familypermease
ABC-type transport system, sugar-family permease {ECO:0000313|EMBL:CAJ68453.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_96_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26667..28163)
DNA (1497bp) protein (499aa)
sugar family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=9 Tax=Clostridium difficile RepID=T3HAP9_CLODC rbh
ABC transporter family protein {ECO:0000313|EMBL:EQH99994.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_96_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28176..29360)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=19 Tax=Clostridium difficile RepID=T3H5W7_CLODC rbh
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH07520.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98177.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
Displaying items 1-30 of 45 in total

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