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NECEvent2014_2_3_scaffold_65_1

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(223..1062)

Top 3 Functional Annotations

Value Algorithm Source
PTS system mannose/fructose/sorbose IID component family protein n=39 Tax=Clostridium difficile RepID=T3ICS4_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 550
  • Evalue 9.20e-154
  • rbh
PTS system, mannose/fructose/sorbose IIDcomponent similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 550
  • Evalue 2.60e-154
PTS system transporter subunit IID {ECO:0000313|EMBL:CKH69364.1}; PTS system, mannose/fructose/sorbose IIDcomponent {ECO:0000313|EMBL:CEJ97020.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 550
  • Evalue 1.30e-153

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 840
ATGTCAGATATAAAAAATGAAGTATCTAAGAAAACGTTAAGCAAGAAAGATGTAATAAAATCATGGTTAAGATGGTTTTTCTTTGCACAATCTAATTACAATTATGAAAGATTGCAATCAACAGCTTTTTCACATTCAATGTTGCCAGTACTTAAAAAATTATATCCAGATAAGGAAGAGTTAAAACAAGAAGTGGAGACTCATCTAGCATTTTTTAACACAGAACCTATATGTGGATGTGTTATACATGGAATAACAATAGCTATGGAAGAAGAAAAAGCTAATGGAGCAGATGAAATAAGTGGAGATGGTATGAATGCTATCAAAACAGGCTTGATGGGTCCACTAGCGGGAATTGGCGATACTTTAACTCAAGGAGTTATAACTCCTATAGTGTTGGCTGTTTGTATTGGTTTAACTGAGGGAGGAGCATCAATTGCAGGACCTATATTATTTGTAATAGCTCAATATATAATAATGACTTCAATTTCTTTTGGAATGTGGACAAATGGATATAAGTATGGGAAAAAAGCTGTTGAAAGTATACTTCAAGGTGGAATAGTAAATAAGGTTATAGAAGGGGCTTCTATACTAGGTACCTTAGTCATGGGGGGACTTGTAGGTAGGTTTATTAATTTATCTACACCAATAAGTTATACTAGTGGTGATTTTAAATTTAGTCTTCAAACGGATTTACTTGATAAGATATTTCCTGGGTTAATTCCTTTGGTACTTACTTTATTAGTACTCTTTGCTTTAAAAAAAGGTCTTTCTCCAATAAAAATAATGTGTATACTGATAGTAGTGGGAGCTATTACAGGTATTTTAGGACTATTTTAA
PROTEIN sequence
Length: 280
MSDIKNEVSKKTLSKKDVIKSWLRWFFFAQSNYNYERLQSTAFSHSMLPVLKKLYPDKEELKQEVETHLAFFNTEPICGCVIHGITIAMEEEKANGADEISGDGMNAIKTGLMGPLAGIGDTLTQGVITPIVLAVCIGLTEGGASIAGPILFVIAQYIIMTSISFGMWTNGYKYGKKAVESILQGGIVNKVIEGASILGTLVMGGLVGRFINLSTPISYTSGDFKFSLQTDLLDKIFPGLIPLVLTLLVLFALKKGLSPIKIMCILIVVGAITGILGLF*