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NECEvent2014_2_3_scaffold_193_32

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 26918..27691

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-B factor n=203 Tax=Clostridium difficile RepID=C9XIC3_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 506
  • Evalue 1.80e-140
  • rbh
RNA polymerase sigma-B factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 506
  • Evalue 5.20e-141
RNA polymerase sigma-B factor (Sigma-37) {ECO:0000313|EMBL:CCK97744.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 506
  • Evalue 2.60e-140

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAAAATGTAGCTAATGCTACACATTACCTAAATATGGATACAAAAGAGCTATTTAATTTATATAATAAAAATAAAAATGTAGACATTAGAAATATTCTTATTGAAAGACATCTGTATTTAGCAAGATTGTTAGCTAAGAAGTATATAAACAAAGGTGTTGATTTTGAAGATATATATCAAGTTGCTTCATTGGCATTAATTTATGCTATTGATAGATATGATGTTGAGAAAGGATTTGAGTTCTCCAGCTTTGCAACACCAACTATAGTAGGAGAAATAAAAAAGTATTTTAGAGATAAGGTATGGACACTTAGAGTCCCAAGAAGAATACAGGAATTAAGCAAAAAGATAAGTGATGCGAAGATTAAATTAGAACAAGAAAATAAGAAGCATCCAAAGGTAAAAGATATAGCTGATTATATAGGCGTTAGTGAAGAAGATGTTTTAGAGGCTATGGAGGCTTCTTATGGATATCAACCAATGTCTTTGGATTCATCAAGTAATGATGATTCAGAGGATAAAGATATAACTCTTATTGATAAGATTGGAAAAGAAGAAGGTAACTTTGGAAGTATAGAGTATGAAGATTTTATTAATAAGTTTATTGAAACTTTAAATGAATTAGAAGTTAAAATTTTTAAAGATAGATTTTTCTTTGATAAAACACAATCTAGTATAGCTAAAGAACTAGGGATATCACAGATGACTGTTTCTAGACTAGAGAAAAAGGTAGTAGAGAAGCTGAAAAAAGAATATGAAAAAAATTTATAA
PROTEIN sequence
Length: 258
MKNVANATHYLNMDTKELFNLYNKNKNVDIRNILIERHLYLARLLAKKYINKGVDFEDIYQVASLALIYAIDRYDVEKGFEFSSFATPTIVGEIKKYFRDKVWTLRVPRRIQELSKKISDAKIKLEQENKKHPKVKDIADYIGVSEEDVLEAMEASYGYQPMSLDSSSNDDSEDKDITLIDKIGKEEGNFGSIEYEDFINKFIETLNELEVKIFKDRFFFDKTQSSIAKELGISQMTVSRLEKKVVEKLKKEYEKNL*