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NECEvent2014_2_3_scaffold_195_12

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 11533..12078

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=193 Tax=Clostridium difficile RepID=T3GW38_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 353
  • Evalue 1.10e-94
  • rbh
Transcriptional regulator, HTH-type similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 353
  • Evalue 3.00e-95
Helix-turn-helix family protein {ECO:0000313|EMBL:EQE65275.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 353
  • Evalue 1.50e-94

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 546
ATGAATGATTTAAATTTAGGGGAAAAAATAGCTGAAGTTCGAAAAAAACAAAACTTAAGTATTCGAGATTTAGCAAAACTAGCTGATGTTACACCATCATTATTGAGCCAAATAGAACGAGGTCTTGCTAATCCATCTGTAAATTCATTAAAATCTATAGCCTCTTCTCTAAACGTTCCTTTATTTACATTTTTTGTATCTGAAGTAGATAAAAAAAACTTGATAGTAAGACATGATAATAGAAAAAAAGTTATTTTACCTGGAAGCAAAGAAGTTATATATGAGATTTTAATTCCAGACTCTAGTGGTAATTTAGAATTTGCAATTATGGATTTAGCTCCAAACACTTCTTCTTGTGTTGATAGGATTACTCATAATGGAGATGAAATTGCATATGTTTTGGAGGGAGAAGTTAAACTTTTTATGGATGATGATGAATTTACTTTGTCCAAAGGAGATAGTGTAAAAGTTCCTTTAGGAACAAAACATAAATGGCAAAATGACTCAAATAGTGAAAGTAAAGTAATTTTTGCAGTCATCTTGTAA
PROTEIN sequence
Length: 182
MNDLNLGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLNVPLFTFFVSEVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSGNLEFAIMDLAPNTSSCVDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIFAVIL*