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NECEvent2014_2_3_scaffold_195

Alias: 172_003_scaffold_195

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_195_1
Streptococcus tigurinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..204
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Streptococcus RepID=M3JM57_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EPX88252.1}; TaxID=1333865 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus tigurinus 2426.;"
glycerophosphoryl diester phosphodiesterase family protein
NECEvent2014_2_3_scaffold_195_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

215..541
DNA (327bp) protein (109aa)
Uncharacterized protein n=23 Tax=Clostridium difficile RepID=T3GV26_CLODC
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH11727.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98347.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_195_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(804..1310)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium difficile DA00211 RepID=T3UKA0_CLODI rbh
Uncharacterized protein {ECO:0000313|EMBL:CDT42215.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
conserved hypothetical protein
NECEvent2014_2_3_scaffold_195_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1328..2686)
DNA (1359bp) protein (453aa)
Two-component sensor histidine kinase n=6 Tax=Clostridium difficile RepID=Q186V1_CLOD6 rbh
Two-component sensor histidine kinase
Membrane associated histidine kinase-like ATPase {ECO:0000313|EMBL:CKH11677.1}; Two-component sensor histidine kinase {ECO:0000313|EMBL:CEJ98345.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridi
NECEvent2014_2_3_scaffold_195_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2688..3419)
DNA (732bp) protein (244aa)
LytTr DNA-binding domain protein n=2 Tax=Clostridium difficile RepID=G6BXT8_CLODI rbh
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EHJ24855.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
Two-component response regulator
NECEvent2014_2_3_scaffold_195_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3697..3927)
DNA (231bp) protein (77aa)
SelenoB, glycine/betaine/sarcosine/D-proline reductase family protein n=204 Tax=Clostridium difficile RepID=T3H0S5_CLODC
sarcosine reductase complex component B subunit alpha
SelenoB, glycine/betaine/sarcosine/D-proline reductase family protein {ECO:0000313|EMBL:EQH99419.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pept
NECEvent2014_2_3_scaffold_195_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3955..5004)
DNA (1050bp) protein (350aa)
Sarcosine reductase complex component B subunit beta {ECO:0000313|EMBL:CCL21930.1}; EC=1.21.4.3 {ECO:0000313|EMBL:CCL21930.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Glycine reductase complex component B subunit gamma n=148 Tax=Clostridium difficile RepID=T3H0A3_CLODC rbh
sarcosine reductase complex component B subunit alpha
NECEvent2014_2_3_scaffold_195_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5090..6376)
DNA (1287bp) protein (429aa)
Glycine/sarcosine/betaine reductase complex,protein B, alpha and beta subunits {ECO:0000313|EMBL:CCL21929.1}; EC=1.21.4.- {ECO:0000313|EMBL:CCL21929.1};; TaxID=1215067 species="Bacteria; Firmicutes; C
Glycine reductase complex component B subunits alpha and beta n=166 Tax=Clostridium difficile RepID=C9XR18_CLODC rbh
sarcosine reductase complex component B subunit alpha
NECEvent2014_2_3_scaffold_195_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6655..7977)
DNA (1323bp) protein (441aa)
AAA domain family protein n=70 Tax=Clostridium difficile RepID=C9XR17_CLODC rbh
two-component response regulator
AAA domain family protein {ECO:0000313|EMBL:EQH99416.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_195_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7977..9971)
DNA (1995bp) protein (665aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
Two-component sensor histidine kinase (EC:2.7.13.3)
His Kinase A domain protein n=27 Tax=Clostridium difficile RepID=T3GVY2_CLODC rbh
NECEvent2014_2_3_scaffold_195_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10058..11323)
DNA (1266bp) protein (422aa)
Citrate transporter n=63 Tax=Clostridium difficile RepID=G6BXU4_CLODI rbh
gluconate permease
Putative gluconate permease {ECO:0000313|EMBL:CBE04340.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
NECEvent2014_2_3_scaffold_195_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11533..12078
DNA (546bp) protein (182aa)
Helix-turn-helix family protein n=193 Tax=Clostridium difficile RepID=T3GW38_CLODC rbh
Transcriptional regulator, HTH-type
Helix-turn-helix family protein {ECO:0000313|EMBL:EQE65275.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_195_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12092..12778
DNA (687bp) protein (229aa)
HAD hydrolase, IA, variant 1 family protein n=70 Tax=Clostridium difficile RepID=T3GXQ7_CLODC rbh
putative hydrolase
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:EQE65310.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
NECEvent2014_2_3_scaffold_195_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12905..13525)
DNA (621bp) protein (207aa)
Vitamin B12 dependent methionine synthase, activation domain protein n=41 Tax=Clostridium difficile RepID=T3GZ17_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68602.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_195_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13515..14537)
DNA (1023bp) protein (341aa)
Uroporphyrinogen decarboxylase family protein n=84 Tax=Clostridium difficile RepID=T3H197_CLODC rbh
hemE; Uroporphyrinogen decarboxylase (URO-D)
Uroporphyrinogen decarboxylase (URO-D) {ECO:0000313|EMBL:CCL29941.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_195_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14538..15176)
DNA (639bp) protein (213aa)
5-methyltetrahydrofolate--homocysteine S-methyltransferase domain protein {ECO:0000313|EMBL:EQE65285.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EQE65285.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostr
5-methyltetrahydrofolate--homocysteine S-methyltransferase domain protein n=180 Tax=Clostridium difficile RepID=C9XR10_CLODC rbh
corrinoid protein
NECEvent2014_2_3_scaffold_195_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15294..16445)
DNA (1152bp) protein (384aa)
Acetyltransferase family protein n=52 Tax=Clostridium difficile RepID=T3GW33_CLODC rbh
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CCL21920.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
NECEvent2014_2_3_scaffold_195_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16867..17679
DNA (813bp) protein (271aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=202 Tax=Clostridium difficile RepID=C9XR08_CLODC rbh
ATP-binding protein
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EQE65313.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
NECEvent2014_2_3_scaffold_195_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17768..17959)
DNA (192bp) protein (64aa)
Uncharacterized protein n=207 Tax=Clostridium difficile RepID=F3Y5U1_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ26451.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_195_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18766..20385
DNA (1620bp) protein (540aa)
Na+/Pi-cotransporter family protein n=125 Tax=Clostridium difficile RepID=T3GZY4_CLODC rbh
Putative sodium:phosphate symporter {ECO:0000313|EMBL:CAJ68596.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
putative sodium:phosphate symporter
NECEvent2014_2_3_scaffold_195_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20759..20953
DNA (195bp) protein (65aa)
Uncharacterized protein n=160 Tax=Clostridium difficile RepID=F3Y5U0_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL21915.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_195_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21512..21835)
DNA (324bp) protein (108aa)
Uncharacterized protein n=13 Tax=Clostridium difficile RepID=T3H2I6_CLODC
uncharacterised protein
Uncharacterised protein {ECO:0000313|EMBL:CEJ98327.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84145.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_195_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21880..22134)
DNA (255bp) protein (85aa)
Uncharacterized protein n=186 Tax=Clostridium difficile RepID=Q186T3_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65304.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_195_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22398..22679)
DNA (282bp) protein (94aa)
Uncharacterized protein n=97 Tax=Clostridium difficile RepID=T3H271_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL21911.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_195_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22992..23801
DNA (810bp) protein (270aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=116 Tax=Clostridium difficile RepID=T3GXY1_CLODC rbh
Transcriptional regulator, AraC family
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQH99400.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
NECEvent2014_2_3_scaffold_195_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23843..24109
DNA (267bp) protein (89aa)
Uncharacterized protein n=195 Tax=Clostridium difficile RepID=T3GZI7_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ24877.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_195_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24391..25155
DNA (765bp) protein (255aa)
putative acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CKH11112.1}; Putative acyltransferase {ECO:0000313|EMBL:CDT42655.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CDT42655.1};; TaxID=1496 species="Ba
Acyltransferase n=175 Tax=Clostridium difficile RepID=G6BXW1_CLODI rbh
NECEvent2014_2_3_scaffold_195_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25218..25502
DNA (285bp) protein (95aa)
Uncharacterized protein n=203 Tax=Clostridium difficile RepID=G6BXW2_CLODI
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CCL29926.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
NECEvent2014_2_3_scaffold_195_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25650..26192
DNA (543bp) protein (181aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T3GY07_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68588.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_195_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26355..27467)
DNA (1113bp) protein (371aa)
Hydantoinase/oxoprolinase family protein n=113 Tax=Clostridium difficile RepID=T3ITD5_CLODC rbh
Group I intron
Putative hydantoinase {ECO:0000313|EMBL:CAJ68586.3}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
Displaying 30 items

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