ggKbase home page

NECEvent2014_2_3_scaffold_218_16

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 12628..13284

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=3 Tax=Clostridium difficile RepID=Q187W0_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 218.0
  • Bit_score: 432
  • Evalue 2.90e-118
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 218.0
  • Bit_score: 432
  • Evalue 8.10e-119
TetR family transcriptional regulator {ECO:0000313|EMBL:CKH18669.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEJ98581.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 218.0
  • Bit_score: 432
  • Evalue 4.00e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 657
ATGACTAGAAAGAACAATCCAAAGCAAGCTATTGAAAATATCATTACCATTTCTGCAAAGTTGTTTGCTGAAAAAGGATATGACAAAACAAGTATGCAAAATATTGTTGATGCTTCAGGAATGTCAAAGGGCGGAATTTTTCATCACTTCAGTTCAAAAGAAGATATTTTTAATGTGGTCATGGAAAGGCGCTTTGAACAGATAATAGAGACAGTAAATCAATGGCTCGGTGAAATGCATGGACTTACAGCAAAAGAGAAGCTTAGAAGTTTAGTTAGGCGGCATTTAACGGATGAGGTGATAAAAGAATCTAGTAACATGATTACAAGCGCGATAGAAAGTCCGCATATCATACTGGCATTTACACAGGATAATTTGAAAAAACTAGCACCAATATTAGCAAATGTTTTACGAGAAGGCATAGAGGATAGAAGCATCATCACAGAGTTCCCAGATGAATGCGCAGAGGTAATTTTGCTGCTCTTTAACTTTTGGTGTGATACAGATGTATTTCAGGGGGACTTTCTTACACTTCGTAAACGGTTTCAATTCTTACAGTTTCTTATGAGACAAATAGGAGTTGATATCCTGGAAGATGAGATTATAGAATCAATTAATATTTTTTATGAAAGGAAACCAATGGGACAGGTAGAGTAA
PROTEIN sequence
Length: 219
MTRKNNPKQAIENIITISAKLFAEKGYDKTSMQNIVDASGMSKGGIFHHFSSKEDIFNVVMERRFEQIIETVNQWLGEMHGLTAKEKLRSLVRRHLTDEVIKESSNMITSAIESPHIILAFTQDNLKKLAPILANVLREGIEDRSIITEFPDECAEVILLLFNFWCDTDVFQGDFLTLRKRFQFLQFLMRQIGVDILEDEIIESINIFYERKPMGQVE*