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NECEvent2014_2_3_scaffold_164_18

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(21062..21418)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, Sorbitol-like IIA component (Glucitol) {ECO:0000313|EMBL:CCL22745.1}; EC=2.7.1.- {ECO:0000313|EMBL:CCL22745.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 3.50e-60
PTS system glucitol/sorbitol-specific IIA component family protein n=211 Tax=Clostridium difficile RepID=C9XLJ6_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 2.50e-60
srlB; PTS system transporter subunit IIA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 7.10e-61

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
ATGAAATATGAAGTTAAGATAAGTGGGATAGGCAGTTTAGTTAAAGAGTTAATGGATGAAAGCAATTGTCTTATTATATATGATGAAACCATTAATGATGACGACTTAAAGGATATATCTGTAATTCATTCAATAGCAACGTTAAAAAGTGATGTTGAAATAGGAGATACACTTACTATAGGGAATAGAGATTATTGTATAGTTTCAGTTGGTGATATTGCTCAGAAGACTCTTAGAGAAATTGGGCATTGTACAATCAAATTTGATGGAAAATGTGAAGTAAATTTACCAGGAGAAATACATGTGGAAATAGGAAATCCAGATATAACTATTGGAGATTTAATAACTATTTCTTAA
PROTEIN sequence
Length: 119
MKYEVKISGIGSLVKELMDESNCLIIYDETINDDDLKDISVIHSIATLKSDVEIGDTLTIGNRDYCIVSVGDIAQKTLREIGHCTIKFDGKCEVNLPGEIHVEIGNPDITIGDLITIS*