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NECEvent2014_2_3_scaffold_164_23

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(26023..26892)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix s, AraC family protein n=57 Tax=Clostridium difficile RepID=T3GED5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 578
  • Evalue 3.30e-162
  • rbh
Transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 289.0
  • Bit_score: 577
  • Evalue 2.10e-162
AraC-family transcriptional regulator {ECO:0000313|EMBL:CKH31715.1}; Transcriptional regulator, AraC family {ECO:0000313|EMBL:CEJ99037.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 289.0
  • Bit_score: 577
  • Evalue 1.00e-161

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 870
TTGGATTACTTAAAGTATTTTGAAAAAGCTGTAATGTATATTGAGAATAATTTACATGAAAATATAACTGTAAATGATGTGGCAAAAGAAACTGGATATTCTTATTATCATTTAACACGCTTATTTAAGTCTATGTTTGGTGAGAGTGTAGGAAGTTATATAAAAAAAAGACGATTAGTAAGTAGTACAAAAGAACTTTTATATAGTGATAAAAAAGTGATAGATATAGCTATTGGTAGTGGATTTGAATCTTCAGAAGCATTTAGCAGAGCATTTAAATCTATATACAAGGTTAGCCCTATAGAATATAGAAAAAATAGAATTGATGTATTTGTTGGTAAAAAGAAAAAATTAGAGTTAGATTTTATGAGACATCTTGTTGGAAATATAACGATTAAACCAGTTATAAAAGAAATAGAAAAAATAAAGGTAATAGGTATAAAGGATAAAGTAATTTTAGAAAATAATTCATTACCTGACTTGTGGGAGAAATTCAGAAAAGTACATCATATTGTCCCAAATACTTTGCCATCAAGGAGAGTTTTTGGAATCTGTGAAGCAATCTCTGAAATACACCTAGTTAGTGAAAGTATGGAGTTTAATGAGATAATAGGACTTGAAGTTAATAGTTATGATGTGATTCCAAATTCATTTGTTTCAAAAACTATTAAGGAAGGAAAGTATGCTATATTTACTCATACTGGTAGCTTAGATAATTTAGACAAAACTTATGAATATATATGGGGTACTTGGTTTTTAAGTTCAAAAGAAGAACTTGATATAAGAGATGATTTTGAAGTATATGATGAACGATTTTTAGGTCCTAGTAATGTGAACTCACAAATTGATATTTATATACCTATAAAATAA
PROTEIN sequence
Length: 290
LDYLKYFEKAVMYIENNLHENITVNDVAKETGYSYYHLTRLFKSMFGESVGSYIKKRRLVSSTKELLYSDKKVIDIAIGSGFESSEAFSRAFKSIYKVSPIEYRKNRIDVFVGKKKKLELDFMRHLVGNITIKPVIKEIEKIKVIGIKDKVILENNSLPDLWEKFRKVHHIVPNTLPSRRVFGICEAISEIHLVSESMEFNEIIGLEVNSYDVIPNSFVSKTIKEGKYAIFTHTGSLDNLDKTYEYIWGTWFLSSKEELDIRDDFEVYDERFLGPSNVNSQIDIYIPIK*