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NECEvent2014_2_3_scaffold_179_23

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 21589..22008

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Firmicutes RepID=C3RNX7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 284
  • Evalue 8.00e-74
putative RNA polymerase sigma factorTn916-like,CTn6-Orf5 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 284
  • Evalue 2.30e-74
Putative RNA polymerase sigma factor Tn916-like,CTn6-Orf5 {ECO:0000313|EMBL:CAJ70226.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 284
  • Evalue 1.10e-73

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGAAGCCATCTGAATTTCAGACAACCATAGAGAACCAGTTTGATTATATCTGTAAAGTCGCTATGGAGGATGAACGCAAAGACTATCTCAAAGCGTTGTCCAGACAGTGTAAACGGGAAACCCTGTTCTGTGATATGGACGATTACACCGTCAATCTGTTTTCTTCCGAAGACACCTATCCATCCCACTTCCATACTTTTGAAATGGATGGATTTACTGTCCGCATTGAAAACAGCCTGTTAGCCGAAGCATTAGAAAGTCTGGACGGAAAGAAACGTGACGTTATCCTGCGATATTATTTTCTTGGATTTGACGATACGGAAATCTCAAAAATTCTGGAAGTCAACCGTTCTACCATCCAGAGAAGAAGACACGCCGGACTGGAATTTATCAAAAAATTTATGGAGGACGAAGCATGA
PROTEIN sequence
Length: 140
MKPSEFQTTIENQFDYICKVAMEDERKDYLKALSRQCKRETLFCDMDDYTVNLFSSEDTYPSHFHTFEMDGFTVRIENSLLAEALESLDGKKRDVILRYYFLGFDDTEISKILEVNRSTIQRRRHAGLEFIKKFMEDEA*