ggKbase home page

NECEvent2014_2_3_scaffold_187_2

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 2412..3578

Top 3 Functional Annotations

Value Algorithm Source
Cystathionine beta-lyase PatB {ECO:0000313|EMBL:EQG74199.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EQG74199.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 388.0
  • Bit_score: 789
  • Evalue 2.30e-225
Cystathionine beta-lyase PatB n=6 Tax=Clostridium difficile RepID=T3GA17_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 388.0
  • Bit_score: 791
  • Evalue 4.30e-226
  • rbh
aminotransferase similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 388.0
  • Bit_score: 786
  • Evalue 3.00e-225

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1167
ATGAATTATAATTTTAATGAGATTGTTGATAGAAGCAATAATTTTTCATCTAAATGGTCAGAAATGGAAAAAAAGTATGGAACTAATGATTTACTTCCTATGTGGGTGGCTGACATGGATTTTAAGGCTGCACCTTGTATAATTGATTCCTTAAAAAATAGACTAGAACAAGAGATTTATGGCTACACAACAAGACCAGATTCTTACAATGAATCTATAGTAAACTGGCTAGATAGGAGACATAACTGGAAAATAAAAAGTGAGTGGTTAATTTATAGTCCAGGTGTTATCCCAGCTATAAGTCTTTTAATAAATGAACTCACAAAAGCAAATGATAAAATAATGATACAAGAACCAGTTTACAGCCCTTTTAATAGTGTTGTAAAAAATAACAATAGAGAACTAATTATAAGCCCATTACAAAAACTAGAAAATGGAGACTACATAATGGATTATGAAGACATTGAAAACAAGATTAAAGATGTAAAATTATTCATACTTTGTAATCCTCATAATCCAGTTGGTAGAGTATGGACAAAAGATGAATTAAAAAAACTAGGAGATATTTGTCTTAAGCATAATGTAAAAATCATATCTGATGAAATACATAGTGACATTATATTAAAAAAACATAAGCATATTCCTATGGCATCTATTTCTAAAGAATTTGAAAAAAATACAATTACTTGTATGGCTCCAACTAAAACTTTTAATATAGCTGGTCTTCAATCATCATATGTAATACTACCTGATGAAAAAGACTATAAATTGTTAGATGATGCCTTTACCAGAATTGATATAAAGAGAAATAATTGCTTTAGCTTAGTTGCAACTGAAGCTTCATATAATAATGGTGAATCTTGGCTAGAATCATTTTTAGAATATTTAGAATCTAATATAGATTTTGCTATAAAATATATAAATGAAAATATGCCAAAACTTAAAGTTAGAAAACCAGAAGGTACTTATTTATTATGGGTAGACTTTAGTGCACTTGGATTAAGTGATGAGGAACTAGAAAGTATACTTGTACAAAAAGGTAAAGTTGCTCTAAATCAAGGAAACAGCTTTGGCATTGGAGGAAGTGGGTATCAAAGAATAAACTTAGCTTGTCCAAGAAGTATGCTTGAAGAAGCTCTTATAAGAATAAAAAATGCAATTAACTAA
PROTEIN sequence
Length: 389
MNYNFNEIVDRSNNFSSKWSEMEKKYGTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLDRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGDYIMDYEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVILPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAIN*