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NECEvent2014_2_3_scaffold_187_6

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 7193..8062

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=203 Tax=Clostridium difficile RepID=C9XNA7_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 569
  • Evalue 2.60e-159
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 569
  • Evalue 7.30e-160
LysR family transcriptional regulator {ECO:0000313|EMBL:CKH85508.1}; Transcriptional regulator, LysR family {ECO:0000313|EMBL:CEJ99363.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 569
  • Evalue 3.60e-159

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 870
ATGGATTTATTGCATCTTAAGTATTTTCAAACTGTTGCTAGAATGGAGCACATAACAAAAGCATCACACAAGTTAAATATAGCACAGCCAGCTTTAAGCAAAACTATATCTTCCTTAGAAAAAGAACTTGGAGTTCAGTTATTTGACAGAAAAGGAAGATATATTGTTTTAAATGAGTATGGAAGATTGTTTCTAAAAAGAGTAGATAGCATTTTAGATTTAGTAGAAAGTTCAAAAAAGGAGTTACAAGACACTTCTTTGGAAAATTCAGGAGAAGTAAAGATATTATCTCCTGCAGCGGCTAATGTGTTACCATCACTTTTGAGTAATTTCAGAAAACTATATCCCAATATTACTTTTAATGTGTCACATACTTTGCCATCATCTTATAAAAAAAGTGATTTTGATTTGTACATATCTTCTTCATTTACAAAGCTAAACTCAGAAAATAGCATAACTTTAACATGCGAAGAAATACTATTAGGAGTTTCAATAAACCATCCTTTATCATTAAAGGATGAAGTATATCTAAGCGAAGTTTCAGATGAAAACTTTATAGTTATAACGAAGGGTGAGAATTATAGAGAGGTAATTGATATCCTGTGCGAATCAGCTAATTTCAAACCCAAAATAGCATTTGAGTCTGATTCACCATATACAATTTATGCTCTTATAAAATCACTTCAAGGAGTTGGATTTATATGTGGAAAATCATGGGGATTATCTCAAGACCCTGAGATTAAGTTGTTACATATCAAAGATATTGAATTTAAAAGATATTTAAATCTTTCATGGTTTAGCGAAAACTATGAATCTAAAGCTGTGTTGTTGTTCAAAAACTTTCTTATCAACTATTTTAAAAATATTTAA
PROTEIN sequence
Length: 290
MDLLHLKYFQTVARMEHITKASHKLNIAQPALSKTISSLEKELGVQLFDRKGRYIVLNEYGRLFLKRVDSILDLVESSKKELQDTSLENSGEVKILSPAAANVLPSLLSNFRKLYPNITFNVSHTLPSSYKKSDFDLYISSSFTKLNSENSITLTCEEILLGVSINHPLSLKDEVYLSEVSDENFIVITKGENYREVIDILCESANFKPKIAFESDSPYTIYALIKSLQGVGFICGKSWGLSQDPEIKLLHIKDIEFKRYLNLSWFSENYESKAVLLFKNFLINYFKNI*