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NECEvent2014_2_3_scaffold_238_2

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 659..934

Top 3 Functional Annotations

Value Algorithm Source
gatB; PTS system galactitol-specific transporter subunit IIB (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 178
  • Evalue 8.80e-43
PTS system, Lactose/Cellobiose specific IIB subunit n=204 Tax=Clostridium difficile RepID=C9XLA8_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 178
  • Evalue 3.10e-42
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EQE61941.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 178
  • Evalue 4.40e-42

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 276
ATGAAAAAAATATTAGTAGCATGTGGAGCAGGAATAGCAACATCAACAGTAGTTTGTGACAAGGTAGAGAGATTAGTTAAGGAAAATAATATACAAGCAGAAGTTATACAATGCAAAATAGCTGAATGTGCAACAAAGCAAGAAGGAGCAGATTTAATAGTATCAACAACTATACTACCAACAACTTATAATATACCAGCAATAAAAGCAACAGCATATATAACTGGAGTAAATACAGCAGCATTAGATAAAAAAATATTAGATGCTTTAAAATAA
PROTEIN sequence
Length: 92
MKKILVACGAGIATSTVVCDKVERLVKENNIQAEVIQCKIAECATKQEGADLIVSTTILPTTYNIPAIKATAYITGVNTAALDKKILDALK*