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NECEvent2014_2_3_scaffold_238_18

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(17138..17338)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=177 Tax=Clostridium difficile RepID=C9XL92_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 136
  • Evalue 7.60e-30
cspD; cold shock protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 136
  • Evalue 2.10e-30
Cold shock protein {ECO:0000313|EMBL:CBE05331.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile ( similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 136
  • Evalue 1.10e-29

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 201
ATGAATAATGGAATAGTAAAATGGTTTAATAATGAAAAAGGATTTGGATTTATATCAATGGAAAGTGGAGATGACGTATTTGCTCATTTCTCAGCTATACAAACTTCAGGATTTAAATCATTAGAAGAAGGTCAAAAAGTAAGCTTTGATATAGTTAAAGGCGCTAGAGGTCCTCAAGCAGAAAATATAACTATATTATAA
PROTEIN sequence
Length: 67
MNNGIVKWFNNEKGFGFISMESGDDVFAHFSAIQTSGFKSLEEGQKVSFDIVKGARGPQAENITIL*