ggKbase home page

NECEvent2014_2_3_scaffold_144_18

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 16564..17577

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein n=18 Tax=Clostridium difficile RepID=T2UZZ0_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 671
  • Evalue 3.30e-190
  • rbh
oppD; ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 671
  • Evalue 1.20e-190
ABC-type transport system, ATP-binding component {ECO:0000313|EMBL:CDS84346.1}; ABC-type transport system, ATP-bindingcomponent {ECO:0000313|EMBL:CEJ97404.1}; Oligopeptide ABC transporter (ATP-binding similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 671
  • Evalue 6.10e-190

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1014
TTGGAGGTTAATAATCTATCTGTAAGTTTTAAAGTAGAAGAAGGAGAAGTTCAGGCTGTAAGAAATGTATCTTTTAATCTAAAAAAAGGTGAGACATTGGCTATAGTTGGAGAATCTGGTTGTGGGAAATCTGTACTGTGTAAGAGTTTGATGAGGATACTCCCATACAATGGATATATTAAAAATGGAGAGGTTTTACTTAAATCAAGTGATTTGGTTAAGAAGTCTGAAAAAGAGATGGAAGATATAAGAGGAAAGAATATATCAATGATATTTCAAGACCCTATGACATCTCTCAATCCAACTATATCAATAGGAAAGCAAATTGCAGAAGCTGTAATCATTCATCAAGGTATAAGTAAAAGTGAGGCAAAAAAGAGAGCCATAGAGCTTATTGAATTGGTTGGAATTGATAATCCTGAGAAAAGATTTAAACAATTTCCACATCATTTTTCAGGTGGAATGAGACAACGTATAGTAATAGCTATAGCACTTGCTTGTAATCCAGATGTATTGATTGCTGATGAACCTACAACTGCTTTAGATGTAACTATACAAGCTCAAATAATTGATTTAATAAAGGATTTACAACATAAAATAGGTTTGTCAATAATATTTATAACTCATGATTTAGGAGTAGTTGCAACTATAGCTGATAGAATAGCAGTTATGTATGCAGGAAAGATTGTAGAAATAGGAACTGTAGAGGATATATTTTATGACCCTAGACATCCATATACTTGGGGGTTGTTGGGTTCATTACCTACTTTAGATTCGCAGGATGACTATTTATATAATATACCTGGAATGCCTCCAAATTTATTGAACCCACCAAAAGGAGATGCTTTTGCAATAAGGAATAAAAATGCACTTAAGATAGATTATGAAAAAGAGCCACCAATGTTTAAAATTAATGATACACATAGTGCAGCAACTTGGTTATTGCACCCAGATGCACCTGAAGTAGATGTACCAGTTAGAGTAAATTGTGGAAGGGTGATTTCTAATGAATAG
PROTEIN sequence
Length: 338
LEVNNLSVSFKVEEGEVQAVRNVSFNLKKGETLAIVGESGCGKSVLCKSLMRILPYNGYIKNGEVLLKSSDLVKKSEKEMEDIRGKNISMIFQDPMTSLNPTISIGKQIAEAVIIHQGISKSEAKKRAIELIELVGIDNPEKRFKQFPHHFSGGMRQRIVIAIALACNPDVLIADEPTTALDVTIQAQIIDLIKDLQHKIGLSIIFITHDLGVVATIADRIAVMYAGKIVEIGTVEDIFYDPRHPYTWGLLGSLPTLDSQDDYLYNIPGMPPNLLNPPKGDAFAIRNKNALKIDYEKEPPMFKINDTHSAATWLLHPDAPEVDVPVRVNCGRVISNE*