ggKbase home page

NECEvent2014_2_3_scaffold_144

Alias: 172_003_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_144_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101..985
DNA (885bp) protein (295aa)
Fumarylacetoacetate (FAA) hydrolase family protein n=123 Tax=Clostridium difficile RepID=T3I7W9_CLODC rbh
isomerase/hydrolase
Fumarylacetoacetate (FAA) hydrolase family protein {ECO:0000313|EMBL:EQE68497.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_144_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1084..2259
DNA (1176bp) protein (392aa)
5-aminoimidazole-4-carboxamide ribonucleotidetransformylase (EC:2.1.2.3)
5-aminoimidazole-4-carboxamide ribonucleotide transformylase {ECO:0000313|EMBL:CAJ67675.1}; EC=2.1.2.3 {ECO:0000313|EMBL:CAJ67675.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridi
AICARFT/IMPCHase bienzyme family protein n=26 Tax=Clostridium difficile RepID=T3I8Y7_CLODC rbh
NECEvent2014_2_3_scaffold_144_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2387..3241
DNA (855bp) protein (285aa)
Phosphatase 2C family protein n=152 Tax=Clostridium difficile RepID=T3I5T2_CLODC rbh
conserved hypothetical protein
Phosphatase 2C family protein {ECO:0000313|EMBL:EQE68495.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_3_scaffold_144_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3285..4520
DNA (1236bp) protein (412aa)
Glycosyl transferases group 1 family protein n=109 Tax=Clostridium difficile RepID=T3I3Z1_CLODC rbh
group 1 glycosyl transferase
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EQE68466.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_3_scaffold_144_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4621..5562
DNA (942bp) protein (314aa)
Cell surface protein n=179 Tax=Clostridium difficile RepID=C9XM74_CLODC rbh
cell surface protein
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:EQG78365.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_144_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5781..6134)
DNA (354bp) protein (118aa)
GIY-YIG catalytic domain protein n=52 Tax=Clostridium difficile RepID=T3I3U9_CLODC
putative nuclease
Nuclease {ECO:0000313|EMBL:CKH56608.1}; Putative nuclease {ECO:0000313|EMBL:CEJ97393.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
NECEvent2014_2_3_scaffold_144_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6421..7341
DNA (921bp) protein (307aa)
Uncharacterized protein n=189 Tax=Clostridium difficile RepID=C9XM76_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67680.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_144_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7601..8035
DNA (435bp) protein (145aa)
Uncharacterized protein n=37 Tax=Clostridium difficile RepID=T3I3L1_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67681.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_144_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8058..9593
DNA (1536bp) protein (512aa)
Uncharacterized protein n=27 Tax=Clostridium difficile RepID=Q18A45_CLOD6 rbh
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH56515.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ97396.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_144_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9677..11044
DNA (1368bp) protein (456aa)
glutamate carboxypeptidase (EC:3.5.1.-)
Putative glutamate carboxypeptidase {ECO:0000313|EMBL:CAJ67683.1}; EC=3.5.1.- {ECO:0000313|EMBL:CAJ67683.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
Amidohydrolase family protein n=121 Tax=Clostridium difficile RepID=T3I8F5_CLODC rbh
NECEvent2014_2_3_scaffold_144_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11016..11303
DNA (288bp) protein (96aa)
NifU-like protein n=1 Tax=Clostridium difficile 70-100-2010 RepID=G6BUS4_CLODI
NifU-like protein {ECO:0000313|EMBL:EFH16817.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NA
hypothetical protein
NECEvent2014_2_3_scaffold_144_12
unknown

Not on your lists

11477..11581
DNA (105bp) protein (35aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_144_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11753..12151)
DNA (399bp) protein (133aa)
Eukaryotic cytochrome b561 family protein n=182 Tax=Clostridium difficile RepID=T3I3G5_CLODC
putative membrane protein
Eukaryotic cytochrome b561 family protein {ECO:0000313|EMBL:EQI88596.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_2_3_scaffold_144_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12154..12588)
DNA (435bp) protein (145aa)
Bacterial regulatory , arsR family protein n=197 Tax=Clostridium difficile RepID=T3I2G2_CLODC
MarR family transcriptional regulator
MarR-family transcriptional regulator {ECO:0000313|EMBL:CBE02826.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
NECEvent2014_2_3_scaffold_144_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12879..13901
DNA (1023bp) protein (341aa)
ABC transporter, permease protein n=48 Tax=Clostridium difficile RepID=G6B6Y0_CLODI rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EHJ31389.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
oppB; oligopeptide ABC transporter permease
NECEvent2014_2_3_scaffold_144_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13885..14796
DNA (912bp) protein (304aa)
Binding--dependent transport system inner membrane component family protein n=135 Tax=Clostridium difficile RepID=T3I2D9_CLODC rbh
oppC; oligopeptide family ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE68471.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_144_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14909..16477
DNA (1569bp) protein (523aa)
Bacterial extracellular solute-binding s, 5 Middle family protein n=147 Tax=Clostridium difficile RepID=T3I7C6_CLODC rbh
oppA; ABC-type transport system, oligopeptide-familyextracellular solute-binding protein
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:EQE68484.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclo
NECEvent2014_2_3_scaffold_144_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16564..17577
DNA (1014bp) protein (338aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein n=18 Tax=Clostridium difficile RepID=T2UZZ0_CLODI rbh
oppD; ABC transporter ATP-binding protein
ABC-type transport system, ATP-binding component {ECO:0000313|EMBL:CDS84346.1}; ABC-type transport system, ATP-bindingcomponent {ECO:0000313|EMBL:CEJ97404.1}; Oligopeptide ABC transporter (ATP-binding
NECEvent2014_2_3_scaffold_144_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17570..18514
DNA (945bp) protein (315aa)
ABC transporter family protein n=44 Tax=Clostridium difficile RepID=T3I593_CLODC rbh
ABC transporter family protein {ECO:0000313|EMBL:EQE68487.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
oppF; oligopeptide ABC transporter ATP-binding protein
NECEvent2014_2_3_scaffold_144_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18873..20498
DNA (1626bp) protein (542aa)
Sigma-54 factor%2C interaction domain-containing protein%2Ctranscriptional regulatory protein levr {ECO:0000313|EMBL:CKH56034.1}; EC=2.7.1.- {ECO:0000313|EMBL:CKH56034.1};; TaxID=1496 species="Bacteri
sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr (EC:2.7.1.-)
Sigma-54 interaction domain protein n=24 Tax=Clostridium difficile RepID=T3I3E6_CLODC rbh
NECEvent2014_2_3_scaffold_144_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20514..21530
DNA (1017bp) protein (339aa)
sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr (EC:2.7.1.-)
AAA domain family protein n=2 Tax=Clostridium difficile RepID=T2YLL0_CLODI
AAA domain family protein {ECO:0000313|EMBL:EQE68498.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_144_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21745..22374
DNA (630bp) protein (210aa)
MgsA AAA+ ATPase family protein n=211 Tax=Clostridium difficile RepID=C9XM89_CLODC rbh
hypothetical protein
Recombination factor protein RarA {ECO:0000313|EMBL:CKH55959.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84780.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
NECEvent2014_2_3_scaffold_144_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22509..22835
DNA (327bp) protein (109aa)
PTS system, IIb component n=202 Tax=Clostridium difficile RepID=C9XM90_CLODC
PTS system transporter subunit IIB
PTS system, lactose/cellobiose-family IIB component {ECO:0000313|EMBL:CCL32959.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
NECEvent2014_2_3_scaffold_144_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22851..24140
DNA (1290bp) protein (430aa)
PTS system, lactose/cellobiose-family IIC membrane component n=163 Tax=Clostridium difficile RepID=Q18A55_CLOD6 rbh
PTS system, IIc component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
NECEvent2014_2_3_scaffold_144_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24164..24493
DNA (330bp) protein (110aa)
PTS system transporter subunit IIA {ECO:0000313|EMBL:CKH55842.1}; EC=2.7.1.- {ECO:0000313|EMBL:CKH55842.1};; PTS system, lactose/cellobiose-family IIAcomponent {ECO:0000313|EMBL:CEJ97410.1}; TaxID=149
PTS system, Lactose/Cellobiose specific IIA subunit n=48 Tax=Clostridium difficile RepID=T3I3F4_CLODC
PTS system, lactose/cellobiose-family IIAcomponent
NECEvent2014_2_3_scaffold_144_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24641..25969
DNA (1329bp) protein (443aa)
Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:CCL32962.1}; EC=3.2.1.122 {ECO:0000313|EMBL:CCL32962.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
6-phospho-alpha-glucosidase n=173 Tax=Clostridium difficile RepID=C9XM93_CLODC rbh
6-phospho-alpha-glucosidase
NECEvent2014_2_3_scaffold_144_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26292..27146
DNA (855bp) protein (285aa)
Macro domain protein n=36 Tax=Clostridium difficile RepID=T3I7D6_CLODC rbh
putative ADP-ribose binding protein
Macro domain protein {ECO:0000313|EMBL:EQG78348.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_144_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27351..28331
DNA (981bp) protein (327aa)
Dienelactone hydrolase family protein n=129 Tax=Clostridium difficile RepID=T3I899_CLODC rbh
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCL20982.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_144_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28534..28983
DNA (450bp) protein (150aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T3I360_CLODC rbh
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH55700.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ97414.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_3_scaffold_144_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29144..30073)
DNA (930bp) protein (310aa)
DNA binding , excisionase family domain protein n=181 Tax=Clostridium difficile RepID=C9XM97_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL20984.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
Displaying items 1-30 of 36 in total

View Taxonomy