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NECEvent2014_2_3_scaffold_144_20

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 18873..20498

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor%2C interaction domain-containing protein%2Ctranscriptional regulatory protein levr {ECO:0000313|EMBL:CKH56034.1}; EC=2.7.1.- {ECO:0000313|EMBL:CKH56034.1};; TaxID=1496 species="Bacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 541.0
  • Bit_score: 1054
  • Evalue 0.0
sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr (EC:2.7.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 541.0
  • Bit_score: 1049
  • Evalue 0.0
Sigma-54 interaction domain protein n=24 Tax=Clostridium difficile RepID=T3I3E6_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 541.0
  • Bit_score: 1054
  • Evalue 0.0
  • rbh

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1626
ATGATATATAAAAAAGATAAAGTAATGAAAGTTTTAGAATCATCATATAGGGAAAATGAAAAAGGGATTACAGCTAACCAATTATCAGAAAAGACAGGAATTGCAAGAAACAATATAAGTACATATTTAAACCAATTATTCAATGAGGGTATGGTTACAAAGATAAAAGGAAGACCTGTGTATTATATCCCTGCAAATCTTAACCTTAACAAGAATGAATTGCTTGATACACAAAGTGAGTTGCTTGGTATAAAAAAAGGAACAAAAGTAGAAAACAAAATAAAAAAAGATAGTTTTGAAACACTAATAGGTAAAGAACATAGTTTAAGACCTATAATAGAAAAATGCAAGGTCGCAATGCTCTATCCTACAAATGGACTTCATACTATTATCTATGGAGAAACAGGAGTAGGAAAGAGTATGATTGCTAGATATATGTACGATTATTCTATAGATAGTGGAATTAGAAAAAATAAAGCTCCTTTTGTAACATTTAATTGTGCTGATTATGCTAATAATGCACAATTACTTATGGGACATATTTTTGGGGTAGAACAAGGAGCTTATACAGGTGCAGAATCTTCCAGAAAAGGTCTTTTGGAAATTGCAAATGGAGGGATACTATTTTTAGATGAAATTCATAGACTACCAGCAGAAGGTCAAGAAATGTTGTTTACTTTTATAGATAAGGGAACATTTAAAAGACTAGGAGATGCAACGAAAGAAAGAGAGTCTAAGGTATTAATAATATGTGCTACTACAGAAAATCCGACATCAACACTATTAGATACATTCAATAGAAGAATACCAATGAAAATAGAAATACCATCACTGAGAGATAGGACAATGATTGAAAGAATGGAATTAGTCAAAAATTTTTTCAAGGAAGAATCAAAAAGTATTTCTATTTCAATAAAAGTACATAAAGAAATAATTAAATCACTATTACTTTATGATTGTAAAAATAATGTAGGTCAACTTCAAAATGATATAAAATTAGCTGTTGCAAATGGATACCTAAGATATAAAAGAGATAATAAAGAACCAGTTTATATAGAGAAAAAATATTTTGATAAATCTATAAATGAAGTGAGTGATGATTATAGAGAGAAGTCTATTAAAGCAGATGAAGTTATAACACATGGAATAGAATATTTTGTATTTACGTCATTAGGAGAAGAAGAAGTTATTAACTACAATGATATAAATATTATTAATGCAGTAAATACTAATCTTAATAAATCTGTAGAAATGAATATAGCAGATGCTTCTCTATTTAATAATGTTAAGTTTAAAAGCATGTGTGAATCAATAAGACAAATTATTAAAGAAGATGAAGAAATAGACATAAGTGAATCAATATTTAAGTCAATGGCAATTTATATAAAAAGCGTATTGGATAAAAGTTGCTCTACAAACAACATAGATTTGAATCAAATTAGAAGAAATAACAGAAGTGAATTTAAAACAGCACTAAAAATAGTTGGAATAATTGAAAATGAATTTGATTTATTTTTATCTATAGAAACTGTAGCATATATTACATTATTCATAGTACAAGCTAAACAAGATGAACAAAATAAAATAGTGAATAACATTAATATTATAGTTGCTATGCATGGATAA
PROTEIN sequence
Length: 542
MIYKKDKVMKVLESSYRENEKGITANQLSEKTGIARNNISTYLNQLFNEGMVTKIKGRPVYYIPANLNLNKNELLDTQSELLGIKKGTKVENKIKKDSFETLIGKEHSLRPIIEKCKVAMLYPTNGLHTIIYGETGVGKSMIARYMYDYSIDSGIRKNKAPFVTFNCADYANNAQLLMGHIFGVEQGAYTGAESSRKGLLEIANGGILFLDEIHRLPAEGQEMLFTFIDKGTFKRLGDATKERESKVLIICATTENPTSTLLDTFNRRIPMKIEIPSLRDRTMIERMELVKNFFKEESKSISISIKVHKEIIKSLLLYDCKNNVGQLQNDIKLAVANGYLRYKRDNKEPVYIEKKYFDKSINEVSDDYREKSIKADEVITHGIEYFVFTSLGEEEVINYNDINIINAVNTNLNKSVEMNIADASLFNNVKFKSMCESIRQIIKEDEEIDISESIFKSMAIYIKSVLDKSCSTNNIDLNQIRRNNRSEFKTALKIVGIIENEFDLFLSIETVAYITLFIVQAKQDEQNKIVNNINIIVAMHG*