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NECEvent2014_2_3_scaffold_144_25

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 24164..24493

Top 3 Functional Annotations

Value Algorithm Source
PTS system transporter subunit IIA {ECO:0000313|EMBL:CKH55842.1}; EC=2.7.1.- {ECO:0000313|EMBL:CKH55842.1};; PTS system, lactose/cellobiose-family IIAcomponent {ECO:0000313|EMBL:CEJ97410.1}; TaxID=149 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 215
  • Evalue 2.90e-53
PTS system, Lactose/Cellobiose specific IIA subunit n=48 Tax=Clostridium difficile RepID=T3I3F4_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 215
  • Evalue 2.10e-53
PTS system, lactose/cellobiose-family IIAcomponent similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 215
  • Evalue 5.90e-54

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 330
ATGGTACCTGAAATGGAAGAAAAAGTATTTAGTATAATATCAGAAGCAGGAGATGCTAAAAGTGATGTAATGATGTCTCTTAAGGAAATAAAAAAAGGTGACTACAATAAAGCAAAACACCTTTTAAATTCAGCCTCAGAGAAAATACAAACAGCATCAAAGTATCATTTAGAATTACTATCAAATGCTATGAATAGTGAAGATAGTGGGACTGATTTTTTAGTTGTGCACTCTGAAGACCATTATTCAAATGCATTATTTGCTCATTCTTTAGTATCTGAACTTGTAGATATATTTGAGATGATGGACCCAAGAATTAATAAGAATTAA
PROTEIN sequence
Length: 110
MVPEMEEKVFSIISEAGDAKSDVMMSLKEIKKGDYNKAKHLLNSASEKIQTASKYHLELLSNAMNSEDSGTDFLVVHSEDHYSNALFAHSLVSELVDIFEMMDPRINKN*