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NECEvent2014_2_3_scaffold_150_19

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(18353..20245)

Top 3 Functional Annotations

Value Algorithm Source
Sensory box protein n=6 Tax=Clostridium difficile RepID=T3GAY1_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 630.0
  • Bit_score: 1239
  • Evalue 0.0
  • rbh
Transcriptional regulator, sigma-54-dependent {ECO:0000313|EMBL:CAJ69757.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 630.0
  • Bit_score: 1239
  • Evalue 0.0
Transcriptional regulator, sigma-54-dependent similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 630.0
  • Bit_score: 1239
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1893
ATGAAGGAAATACTTGTTATTGCTCCCACTAAAGGAACCTATGAAAAATCAATTCACATAGTTAAAAAAAACAAATATAAAACTATTGATGTTGTATTTGGCAATCTAAAAGAAGGTATACCTCTTGCTGAAAAAAGTATTAATCATGGTACTAGAATTATCATAAGCCGAGGTGGAACTTACAATATGTTAAAAGCTACTTACAATATACCTATAGTTGAAATTAAGGTAGATGCTTATGATATTATAAAAAGCTACAAAGAGGTAAAAAATTCCAATGAACCATTTGGAATAATTGGATTTAATAATGTCATCTACGGTTTCGATATTATAGAAGAAATATTGAATAAGAAAATAACTATGATTGAAATTGAAAAAGAAGAAGAAATTTATGATGCTATAGAAAAGTACAGAAAGAAAGGTATAAACACATATATAGGAGATACCACTGTTGCACATATTGTTAAGAGACTTAATTGTAAGGGAATATTAATCGAATCTAGAGAAGAAAACATACTTAGAGCCATTCAACAAGCAGAACAAATACTCGAAGCAACCAAGGATGAACAAAAAAGAAGATTACAGATAGAAGCTATGACAGATTTTGTACATGATGGAATAATAACAGTTGATAAAAATTTTAAAATAACATTATTTAATAAGAGTGCTGAAAAAATATTTGGTATAAAAAAAGAAAATGCACTTTATCATAATGTTGTAGATGTTATCCCAAACACAGTTCTTCCACAAGTAGTTGAGACTATGGAACCTCAAATTGGTGAAATACAAAATATAGGGAGTACAAAAATTATTACAAATAGAGTTCCAATCATTGTTGATGGTCAGATTCAAGGGGCTGTTTCAACATTTCAAGATAGCAAGGAGATAAGTTCTTTTGAACATACAATAAGAAGGAGCTTATTAAGCAAAGGTCTATCTGCTAAATACACTTTTGATGATATAATTCATGCTAGTAAAAAGACAAAAGATTGTATAGAACTTGCAAAAAAATATGCTTGTTATGATACTCCTATGATTATTACTGGAGAATCTGGAGTTGGTAAAGAACTATTTTGTCAAAGTATACATAACTATAGTAAGCGTAAAAATGCACCTTTTGTTGCTGTAAATTGTGCTGCCATACCTCCATCTCTAATAGAGAGTGAGTTTTTTGGTTATGAGGAAGGTTCATTTACAGGTGCTAGAAAAAAAGGTAAAGCAGGTGTATTCGAACTAGCACATGAAGGCACAATCTTCCTAGATGAAATAAGTGAAATCCCTCTTGAACTTCAAGGTCGATTATTGAGGGTATTGCAGGAAAAACAAGTTATGAGAATTGGTGGTGATAAAGTTATTCCTATAGATGTAAAAATTATCTGTGCTTCAAATAAAGACTTAAAAAATATGATGCGCAATGGTTTATTTAGACAAGACCTTTATTTTAGAATAAATATACTAACATTATATCTTCCTTCATTAAAAGAAAGAAAAGAAGATATTATAAAATTATCAGAATTTTTTATACATAAATATTCAAGCAAATACAATAAAACGCCTTTAATTATCACTCCAAATATTAAAAAGGCACTTCTTGAACGAGAATATGAAGGTAATATAAGGGAATTGGAAGGTATGATGGAAAGGGCTGTTATTGTGGAATCATTTGACTCGATTTTATTAGAAAAGCTTAGCAATGAATATACAAATAATATAGTTGATAAAGATAATAGTGATTTTGAATGCAGTAATTTAGATTTAAAAACTTTAGAAAAAAAATATATCTATAAAATTTATAACGAAAATAATAGAAATACTACAAAAACCTGTGAAATTCTAAAGATAACTCGCTCCACTCTATGGCGTAAGTTAAAAGAAATAGAAGATGATGTTTAA
PROTEIN sequence
Length: 631
MKEILVIAPTKGTYEKSIHIVKKNKYKTIDVVFGNLKEGIPLAEKSINHGTRIIISRGGTYNMLKATYNIPIVEIKVDAYDIIKSYKEVKNSNEPFGIIGFNNVIYGFDIIEEILNKKITMIEIEKEEEIYDAIEKYRKKGINTYIGDTTVAHIVKRLNCKGILIESREENILRAIQQAEQILEATKDEQKRRLQIEAMTDFVHDGIITVDKNFKITLFNKSAEKIFGIKKENALYHNVVDVIPNTVLPQVVETMEPQIGEIQNIGSTKIITNRVPIIVDGQIQGAVSTFQDSKEISSFEHTIRRSLLSKGLSAKYTFDDIIHASKKTKDCIELAKKYACYDTPMIITGESGVGKELFCQSIHNYSKRKNAPFVAVNCAAIPPSLIESEFFGYEEGSFTGARKKGKAGVFELAHEGTIFLDEISEIPLELQGRLLRVLQEKQVMRIGGDKVIPIDVKIICASNKDLKNMMRNGLFRQDLYFRINILTLYLPSLKERKEDIIKLSEFFIHKYSSKYNKTPLIITPNIKKALLEREYEGNIRELEGMMERAVIVESFDSILLEKLSNEYTNNIVDKDNSDFECSNLDLKTLEKKYIYKIYNENNRNTTKTCEILKITRSTLWRKLKEIEDDV*