ggKbase home page

NECEvent2014_2_3_scaffold_158_19

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(23325..24467)

Top 3 Functional Annotations

Value Algorithm Source
Integrase n=176 Tax=Clostridium difficile RepID=C9XJT1_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 380.0
  • Bit_score: 745
  • Evalue 3.50e-212
  • rbh
integrase similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 380.0
  • Bit_score: 745
  • Evalue 9.80e-213
Integrase {ECO:0000313|EMBL:CBE04934.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R2 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 380.0
  • Bit_score: 745
  • Evalue 4.90e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1143
ATGTATAAAATTTTGATTGGTGGGTTACATATGAATGCATTTATTAGAAAAAGAAATAAAAACTATGTTGTTTACCTGGAATTTGAAGATGAAAAGACAGGTAAAAGAAAACAAAAAAATATGGGTACTTTTGATAAAAAAAGGGAAGCAAGTAAAAGACTAAATGAGGTAAAAGAAAGCTTATATAATGATGGTTTTTTAGTACCAAGCGAAATTACAGTGTCAGAATTTCTATTAGATTTTCTAAATAAATATAGTGAAAATATATCTTTAGCTACATATAATAATTATGTTAGTATTTGTAAGAATTACATTAATCCATCTATTGGAAAATATAAAATACAAGACTTACATCCGGTTCACATACAAAACTACATAGATAAACTATCTTATAAACTAAATCCTCAATCAATTAAGATTCATATAAATATATTGAAACTTGCAATAAAAAGAGCTTATAGACTCAAATTAATAAAAGAAAATGTTATGGATAGTATAAAGGCTCCAAGATATAAAAAATTTAAAAATGAGATTTATGATAGAGAACAAATGATAAAATTATTAGATTTAGCAAAAAATACAGAAATGGAATTACCTATTAATTTGGCTATTGGATTAGGTCTTAGAATTTCAGAAGTTTTAGGTCTAACTTGGGATAATATTGATTTTGAAGAAAATACAATAACAGTAAATAAGATAACTTCCCGAATTAATGGTTCTGTTATTCTCAAAGAGCCAAAGACAGAAAGCTCTGTTAGAAAAATATCTTCTCCCAAAGAATTAATGTCTTTATTAAAAGAATATAAAATAAAACAGAATAAAAATTTATTAAAATCTTCCATTAGAAATAATAATAATTTGTTGTTTTTCAATAAGAAATGTGAACCTATTGCTGAAGATGTTATGAGTAAAAAATTTAAAAGATTTTTAGAAAAGAATGAATTACCTCATATTAGATTCCATGATTTAAGACACTCACATGTTACTTTACTTATAAATTCTAAAGTACCTATAAAGGTTATATCCGAGAGAGTAGGACACTCAAATATAAGTACTACTCTAAGCGTTTATTCTCATGTACTTAAAGAAATGGATAAAGAGGCTTCTGACAAAATTTCTGAAAGTTTATTTAATGCTAATTAA
PROTEIN sequence
Length: 381
MYKILIGGLHMNAFIRKRNKNYVVYLEFEDEKTGKRKQKNMGTFDKKREASKRLNEVKESLYNDGFLVPSEITVSEFLLDFLNKYSENISLATYNNYVSICKNYINPSIGKYKIQDLHPVHIQNYIDKLSYKLNPQSIKIHINILKLAIKRAYRLKLIKENVMDSIKAPRYKKFKNEIYDREQMIKLLDLAKNTEMELPINLAIGLGLRISEVLGLTWDNIDFEENTITVNKITSRINGSVILKEPKTESSVRKISSPKELMSLLKEYKIKQNKNLLKSSIRNNNNLLFFNKKCEPIAEDVMSKKFKRFLEKNELPHIRFHDLRHSHVTLLINSKVPIKVISERVGHSNISTTLSVYSHVLKEMDKEASDKISESLFNAN*