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NECEvent2014_2_3_scaffold_158

Alias: 172_003_scaffold_158

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_158_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..247
DNA (246bp) protein (82aa)
Peptidase {ECO:0000313|EMBL:CKH21092.1}; EC=3.5.1.- {ECO:0000313|EMBL:CKH21092.1};; Putative peptidase, M20 family {ECO:0000313|EMBL:CDT16455.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia;
Peptidase M20/M25/M40 family protein n=2 Tax=Clostridium difficile RepID=T2Y3Q0_CLODI
peptidase
NECEvent2014_2_3_scaffold_158_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

380..1750
DNA (1371bp) protein (457aa)
D-hydantoinase (EC:3.5.2.2)
D-hydantoinase {ECO:0000313|EMBL:CKH21064.1}; EC=3.5.2.- {ECO:0000313|EMBL:CKH21064.1};; D-hydantoinase (Dihydropyrimidinase) {ECO:0000313|EMBL:CEJ98679.1}; EC=3.5.2.2 {ECO:0000313|EMBL:CEJ98679.1};;
Dihydropyrimidinase n=21 Tax=Clostridium difficile RepID=T3GP28_CLODC rbh
NECEvent2014_2_3_scaffold_158_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1750..3174
DNA (1425bp) protein (475aa)
Amidohydrolase family protein n=8 Tax=Clostridium difficile RepID=G6B950_CLODI rbh
amidohydrolase
Probable amidohydrolase {ECO:0000313|EMBL:CBE04962.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_158_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3225..3692
DNA (468bp) protein (156aa)
Xanthine dehydrogenase iron-sulfur binding subunit n=5 Tax=Clostridium difficile RepID=C9XJU6_CLODC rbh
xdhC; xanthine dehydrogenase iron-sulfur binding subunit
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:EHJ27463.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
NECEvent2014_2_3_scaffold_158_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3731..4525
DNA (795bp) protein (265aa)
putative FAD-binding subunit of xanthinedehydrogenase (EC:1.17.1.4)
FAD binding domain in molybdopterin dehydrogenase family protein n=84 Tax=Clostridium difficile RepID=T3GK16_CLODC rbh
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EHJ29505.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
NECEvent2014_2_3_scaffold_158_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4515..6806
DNA (2292bp) protein (764aa)
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:CAJ68964.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CAJ68964.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
xdhA1; Xanthine dehydrogenase, molybdenum bindingsubunit (EC:1.17.1.4)
Molybdopterin-binding domain of aldehyde dehydrogenase family protein n=46 Tax=Clostridium difficile RepID=T3GLN3_CLODC rbh
NECEvent2014_2_3_scaffold_158_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6807..8120
DNA (1314bp) protein (438aa)
putative S-adenosylhomocysteine deaminase (EC:3.5.4.28)
Amidohydrolase {ECO:0000313|EMBL:CKH20925.1}; EC=3.5.4.28 {ECO:0000313|EMBL:CKH20925.1};; Putative S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:CDS88135.1}; EC=3.5.4.28 {ECO:0000313|EMBL:CDS8813
Amidohydrolase family protein n=125 Tax=Clostridium difficile RepID=T3GP23_CLODC rbh
NECEvent2014_2_3_scaffold_158_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8156..9241
DNA (1086bp) protein (362aa)
pyrD1; Dihydroorotate dehydrogenase, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase family domain protein {ECO:0000313|EMBL:EQH99713.1}; EC=1.3.-.- {ECO:0000313|EMBL:EQH99713.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
Dihydroorotate dehydrogenase family domain protein n=87 Tax=Clostridium difficile RepID=T3GNE1_CLODC rbh
NECEvent2014_2_3_scaffold_158_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9477..10562
DNA (1086bp) protein (362aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=Q188E4_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68961.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_158_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11908..13266
DNA (1359bp) protein (453aa)
Permease family protein n=154 Tax=Clostridium difficile RepID=T3GP44_CLODC rbh
pbuX; putative xanthine permease
Putative xanthine permease {ECO:0000313|EMBL:CCL22352.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
NECEvent2014_2_3_scaffold_158_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13373..14167
DNA (795bp) protein (265aa)
FAD binding domain in molybdopterin dehydrogenase family protein n=86 Tax=Clostridium difficile RepID=T3GNG4_CLODC rbh
xanthine dehydrogenase FAD-binding subunit
FAD binding domain in molybdopterin dehydrogenase family protein {ECO:0000313|EMBL:EQH99710.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
NECEvent2014_2_3_scaffold_158_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14160..16466
DNA (2307bp) protein (769aa)
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:CAJ68958.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CAJ68958.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
xdhA; Xanthine dehydrogenase, molybdenum bindingsubunit (EC:1.17.1.4)
Molybdopterin-binding domain of aldehyde dehydrogenase family protein n=25 Tax=Clostridium difficile RepID=T3GJ27_CLODC rbh
NECEvent2014_2_3_scaffold_158_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16569..17882
DNA (1314bp) protein (438aa)
Transposase, IS605 OrfB family n=142 Tax=Clostridium difficile RepID=G6BRJ4_CLODI rbh
transposase
Putative transposase {ECO:0000313|EMBL:CBE04944.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_158_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18065..18787
DNA (723bp) protein (241aa)
Uncharacterized protein n=27 Tax=Clostridium difficile RepID=Q188D9_CLOD6 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68956.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_158_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18894..19463
DNA (570bp) protein (190aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=Q188E0_CLOD6 rbh
putative molybdopterin-guanine dinucleotidebiosynthesis protein
Putative molybdopterin-guanine dinucleotide biosynthesis protein {ECO:0000313|EMBL:CAJ68955.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
NECEvent2014_2_3_scaffold_158_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19460..20479
DNA (1020bp) protein (340aa)
Molybdopterin binding domain protein n=189 Tax=Clostridium difficile RepID=G6BRJ7_CLODI rbh
molybdopterin biosynthesis protein
Putative molybdopterin binding domain protein {ECO:0000313|EMBL:EQH99705.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="
NECEvent2014_2_3_scaffold_158_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20817..22442
DNA (1626bp) protein (542aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CCL22344.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL22344.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptost
ABC transporter family protein n=157 Tax=Clostridium difficile RepID=C9XJT3_CLODC rbh
ABC transporter ATP-binding protein
NECEvent2014_2_3_scaffold_158_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22641..23117
DNA (477bp) protein (159aa)
Uncharacterized protein n=71 Tax=Clostridium difficile RepID=T3GP48_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22343.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_158_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23325..24467)
DNA (1143bp) protein (381aa)
Integrase n=176 Tax=Clostridium difficile RepID=C9XJT1_CLODC rbh
integrase
Integrase {ECO:0000313|EMBL:CBE04934.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R2
NECEvent2014_2_3_scaffold_158_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24778..25155
DNA (378bp) protein (126aa)
Penicillinase repressor family protein n=213 Tax=Clostridium difficile RepID=C9XJT0_CLODC
regulatory protein
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EHJ29773.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_158_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25592..25855)
DNA (264bp) protein (88aa)
Uncharacterized protein n=166 Tax=Clostridium difficile RepID=Q188D1_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22341.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_158_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26171..26746
DNA (576bp) protein (192aa)
Uncharacterized protein n=210 Tax=Clostridium difficile RepID=Q188D2_CLOD6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK98420.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_158_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26844..27842
DNA (999bp) protein (333aa)
Uncharacterized protein n=173 Tax=Clostridium difficile RepID=C9XJS7_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30273.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_158_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28179..28817
DNA (639bp) protein (213aa)
Uncharacterized protein n=169 Tax=Clostridium difficile RepID=T3GK75_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQH99697.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_158_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28844..29743
DNA (900bp) protein (300aa)
Lipid kinase, YegS/Rv2252/BmrU family protein {ECO:0000313|EMBL:EQE63218.1}; EC=2.7.1.- {ECO:0000313|EMBL:EQE63218.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
Lipid kinase, YegS/Rv2252/BmrU family protein n=204 Tax=Clostridium difficile RepID=C9XJS5_CLODC rbh
lipid kinase
NECEvent2014_2_3_scaffold_158_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29850..31514)
DNA (1665bp) protein (555aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
glnS; glutaminyl-tRNA ligase (EC:6.1.1.18)
Glutamine--tRNA ligase n=179 Tax=Clostridium difficile RepID=SYQ_CLOD6 rbh
NECEvent2014_2_3_scaffold_158_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31806..32519
DNA (714bp) protein (238aa)
Uncharacterized protein n=109 Tax=Clostridium difficile RepID=Q188C4_CLOD6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE63226.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
Displaying 27 items

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