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NECEvent2014_2_3_scaffold_411_4

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(2021..2515)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=6 Tax=Clostridium difficile RepID=T2TYI1_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 164.0
  • Bit_score: 332
  • Evalue 1.80e-88
  • rbh
putative extrachromosomal origin protein similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 164.0
  • Bit_score: 329
  • Evalue 4.20e-88
Putative extrachromosomal origin protein {ECO:0000313|EMBL:CAJ69108.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 164.0
  • Bit_score: 329
  • Evalue 2.10e-87

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 495
GTGTGTATTTTTTTCTCTTTTTTTTTGAAATTTATCGAAGATTTAACGCCCTCCCACCGTGATAGGAGTAAGCAAGGTTATTTAACTCCTTGCGATGGAAAGACAATTGAACATCAATTCGACAGTTTCTGTAAAACAGTTTTGCGTAACTATGCTAGAGATATTTATGACGAAAATAAACGCAGAAATGATTATTTGGTATCTCTCGAATCTTTGTCACTTGCAGAATTAAGTAAATTGAGTATTTTAGATGATTATGATTCTAACTACATCTGTATGGTTTCTTACGACTACAACATACGAATTGAAGATGTATTAATGGCGCAAGCAATCGGAAAACTTACAAAAAGAAAACAAGATATAATTCTACTTTCATTCTTTCTCAACATGACAAATGCTGACATAGCAACATTGATGGATTTAGCAGAAAATACCATACATTATCACAAAACAAATGCACTAAAAGAGTTGAAAGAACTCATGCAGGAACATTGA
PROTEIN sequence
Length: 165
VCIFFSFFLKFIEDLTPSHRDRSKQGYLTPCDGKTIEHQFDSFCKTVLRNYARDIYDENKRRNDYLVSLESLSLAELSKLSILDDYDSNYICMVSYDYNIRIEDVLMAQAIGKLTKRKQDIILLSFFLNMTNADIATLMDLAENTIHYHKTNALKELKELMQEH*