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NECEvent2014_2_3_scaffold_270_10

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(9762..10652)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, tetR family protein n=91 Tax=Clostridium difficile RepID=T3GEM9_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 580
  • Evalue 8.80e-163
  • rbh
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EQG75501.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 296.0
  • Bit_score: 579
  • Evalue 3.60e-162
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 296.0
  • Bit_score: 578
  • Evalue 1.20e-162

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 891
GTGACAGAAAAACAAAGGCTCATTATAACTATTGCACAAAAAATTTTTGACCAAAAGGGTTTTCAAAATACTTCAATATCGGATGTTGTAAAAGAGTGTAAAATGTCTAAAGCTACTTTTTACAAGCATTTTGAAACTAAGGAAAGTTTTATCTGCGAAATAATCAATTATTATGATGAAAAGTTTTTAGAAATTATACATTCCATAAACGAAAATAATGACATTCCATCATCAGAAAAGTTAAACAGAAAGATAATTGCTGTATGGAAAAATATTTTTTCTAGAACTACCATAAATACCTATATAAGAGAAAACTTTTCTGAAGAGCAACGTAAGGCTACAAGTAAATTGCAAACAAAATCACGAGCTAACTTATTGAATGAATACAAATTAAGCTTATTTGATAACTATGGTGATAAAATAGAAAAAATTATATTTGATTTAGTTTTCTTATTGGATGCTCTAATTCATCAGTTTATATACATTATTCATGTACAAAAAAGAGAAATAAATGTATACTTTATTGCCAAATTTACTATACAAATTCTAGATTTAGTTGTAGAAAATATGGATAATCTAAATCCTTTAATTGAAAAATCAATGTTTTTACATAAACAAGAAGATGAAGTTTACTTTTCCCTTCATAATAAATCGCTATTTTTTAAAACGATACAAGATATAGAAGAACTAATCAAAACTGATACTTCTCTCCTTGAAAATCCTAAATTACTAGAAGCAATAAAAAAATTATACGTCGAGGGAAAAAATCAACAATATGATTCTTTAATTATGGATGCAATGATTGCATATTTAGAAAAAGAAGACACTTTAAGACCAAAAGTACTTTTATTGAACAGCATTAAAAATCAATTAAAAAAGGAGACGTTATAA
PROTEIN sequence
Length: 297
VTEKQRLIITIAQKIFDQKGFQNTSISDVVKECKMSKATFYKHFETKESFICEIINYYDEKFLEIIHSINENNDIPSSEKLNRKIIAVWKNIFSRTTINTYIRENFSEEQRKATSKLQTKSRANLLNEYKLSLFDNYGDKIEKIIFDLVFLLDALIHQFIYIIHVQKREINVYFIAKFTIQILDLVVENMDNLNPLIEKSMFLHKQEDEVYFSLHNKSLFFKTIQDIEELIKTDTSLLENPKLLEAIKKLYVEGKNQQYDSLIMDAMIAYLEKEDTLRPKVLLLNSIKNQLKKETL*